LOCUS BC010920 978 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 10, mRNA (cDNA clone MGC:13492 IMAGE:4246806),
complete cds.
ACCESSION BC010920
VERSION BC010920.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 978)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 978)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38570070.
FEATURES Location/Qualifiers
source 1..978
/db_xref="H-InvDB:HIT000035120"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13492 IMAGE:4246806"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..978
/gene="CLDN10"
/gene_synonym="CPETRL3"
/gene_synonym="OSP-L"
/db_xref="GeneID:9071"
/db_xref="HGNC:HGNC:2033"
CDS 34..720
/gene="CLDN10"
/gene_synonym="CPETRL3"
/gene_synonym="OSP-L"
/codon_start=1
/product="claudin 10"
/protein_id="AAH10920.1"
/db_xref="GeneID:9071"
/db_xref="HGNC:HGNC:2033"
/translation="MASTASEIIAFMVSISGWVLVSSTLPTDYWKVSTIDGTVITTAT
YWANLWKACVTDSTGVSNCKDFPSMLALDGYIQACRGLMIAAVSLGFFGSIFALFGMK
CTKVGGSDKAKAKIACLAGIVFILSGLCSMTGCSLYANKITTEFFDPLFVEQKYELGA
ALFIGWAGASLCIIGGVIFCFSISDNNKTPRYTYNGATSVMSSRTKYHGGEDFKTTNP
SKQFDKNAYV"
BASE COUNT 280 a 214 c 216 g 268 t
ORIGIN
1 ggggggagag cgagcgcggc tgcagccggc ggcatggcta gcacggcttc ggagatcatc
61 gccttcatgg tctccatctc aggctgggta ctggtgtcct ccacgctgcc caccgactac
121 tggaaggtgt ctaccatcga cggcacggtc atcacaaccg ccacctattg ggccaacctg
181 tggaaggcgt gcgttaccga ctccacgggc gtctccaact gcaaggactt cccctccatg
241 ctggcgctgg acggttatat acaggcatgt agaggactta tgatcgctgc tgtcagcctg
301 ggcttctttg gttccatatt tgcgctcttt ggaatgaagt gtaccaaagt cggaggctcc
361 gataaagcca aagctaaaat tgcttgtttg gctgggattg tattcatact gtcagggctg
421 tgctcaatga ctggatgttc cctatatgca aacaaaatca caacggaatt ctttgatcct
481 ctctttgttg agcaaaagta tgaattagga gccgctctgt ttattggatg ggcaggagcc
541 tcactgtgca taattggtgg tgtcatattt tgcttttcaa tatctgacaa caacaaaaca
601 cccagataca catacaacgg ggccacatct gtcatgtctt ctcggacaaa gtatcatggt
661 ggagaagatt ttaaaacaac aaacccttca aaacagtttg ataaaaatgc ttatgtctaa
721 aagagctcgc tggcaagctg cctcttgagt ttgttataaa agcgaactgt tcacaaaatg
781 atcccatcaa ggccctccca taattaacac tcaaaactat ttttaaaata tgcatttgaa
841 gcatctgttg attgtatgga tgtaagtgtt cttacatagt tagttatata ctaatcattt
901 tctgttgtgg ctttctataa aaaataaaca gtttatttac aggatttgaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaa
//