LOCUS BC010893 987 bp mRNA linear HUM 19-APR-2005
DEFINITION Homo sapiens chromatin modifying protein 4A, mRNA (cDNA clone
IMAGE:4295071), partial cds.
ACCESSION BC010893
VERSION BC010893.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 987)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 987)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: o Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548421.
FEATURES Location/Qualifiers
source 1..987
/db_xref="H-InvDB:HIT000035098"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4295071"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..987
/gene="CHMP4A"
/gene_synonym="C14orf123"
/gene_synonym="CHMP4B"
/gene_synonym="HSPC134"
/gene_synonym="Shax2"
/gene_synonym="SNF7-1"
/db_xref="GeneID:29082"
CDS <1..697
/gene="CHMP4A"
/gene_synonym="C14orf123"
/gene_synonym="CHMP4B"
/gene_synonym="HSPC134"
/gene_synonym="Shax2"
/gene_synonym="SNF7-1"
/codon_start=2
/product="CHMP4A protein"
/protein_id="AAH10893.2"
/db_xref="GeneID:29082"
/translation="GGGGRGELAMSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIK
KQEFLEQKIQQELQTAKKYGTKNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAI
ENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMG
FRDDVDEDELLEELEELEQEELAQELLNVGDKEEEPSVKLPSVPSTHLPAGPAPKVDE
DEEALKQLAEWVS"
BASE COUNT 307 a 202 c 280 g 198 t
ORIGIN
1 ggggggaggc gggagaggcg agctcgcgat gagtggtctc ggcaggctct tcgggaaggg
61 gaagaaggag aaagggccaa cccctgaaga agcaatacag aaactgaagg agacagagaa
121 gatactgatc aagaaacagg aatttttgga gcagaagatt caacaggagc tacaaacagc
181 caagaagtat gggaccaaga ataagagagc tgccctacag gctttgcgga ggaagaaaag
241 attcgaacag cagctggcac aaactgacgg gacattatcc accctggagt ttcagcgtga
301 ggccattgag aatgccacta ccaatgcaga agtccttcgt accatggagc ttgctgccca
361 aagcatgaag aaggcctacc aggacatgga cattgacaag gtagatgaac tgatgactga
421 catcacggaa caacaggagg tggcccagca gatctcagat gccatttctc ggcctatggg
481 ctttagagat gatgtggatg aggatgaact gctggaggag ctagaggagc tggagcagga
541 ggaattggcc caggagttgt taaatgtggg cgacaaggaa gaagaaccct cagtcaaatt
601 gcctagtgta ccttctactc atctgccggc agggccagct cccaaagtgg atgaagatga
661 agaagcacta aagcagttgg ctgagtgggt atcctgataa atctgggctt gtcttcctaa
721 tgctaccttt gttggtcctt tcttccttaa gtgccaagtg ctgagctaaa ggaggataac
781 tttttgggga agtcatgctg agggtggtag tgtgaccctg cctgaaaaaa gggtctctta
841 ccctcccagc cctggctcaa ctctgaagaa ggatcttgct acagaaggag cccttgggct
901 cccttctctt tgatagcagt tataatgccc ttgttcccaa taaaactggg cagatagaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//