LOCUS BC010889 812 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 53, mRNA (cDNA clone
MGC:13336 IMAGE:4272385), complete cds.
ACCESSION BC010889
VERSION BC010889.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705621.
FEATURES Location/Qualifiers
source 1..812
/db_xref="H-InvDB:HIT000035095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13336 IMAGE:4272385"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..812
/gene="CCDC53"
/gene_synonym="CGI-116"
/db_xref="GeneID:51019"
/db_xref="HGNC:HGNC:24256"
CDS 34..618
/gene="CCDC53"
/gene_synonym="CGI-116"
/codon_start=1
/product="coiled-coil domain containing 53"
/protein_id="AAH10889.1"
/db_xref="GeneID:51019"
/db_xref="HGNC:HGNC:24256"
/translation="MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRF
STVCEEKLADLSLRIQQIETTLNILDAKLSSIPGLDDVTVEVSPLNVTSVTNGAHPEA
TSEQPQQSSTQDSGLQESEVSAENILTVAKDPRYARYLKMVQVGVPVMAIRNKMISEG
LDPDLLERPDAPVPDGESEKTVEESSDSESSFSD"
BASE COUNT 284 a 163 c 168 g 197 t
ORIGIN
1 gggggaactc ggggtccacc gcccgctgag gagatggatg aggacgggct tcctctcatg
61 gggtcaggca tagacctgac caaggtgcca gctattcaac agaaaagaac ggtggctttt
121 ctaaaccaat ttgtggtgca cactgtacag ttcctcaacc gcttttctac agtttgtgag
181 gagaaactgg cagacctttc acttcgtatc caacaaattg aaacaactct caatatttta
241 gatgcaaagt tgtcatctat cccaggccta gatgatgtca cagttgaagt atctccttta
301 aatgtcacca gtgtcacaaa tggagcacat cctgaagcca cttcagagca accacagcag
361 agcagtacac aagactctgg actacaggaa agtgaagtat cagcagaaaa tatcttaact
421 gtagccaagg atccaagata tgccagatat ctcaaaatgg ttcaagtggg tgtaccagtg
481 atggcaataa gaaacaaaat gatatcagaa ggactagacc cagatcttct tgagaggcca
541 gatgctccag tgcctgatgg cgaaagtgag aaaactgtag aagaaagttc agatagcgaa
601 tcttctttta gtgattaagc ttaattttga taagaattac atatgcatgc ataggggtac
661 atttacattc tgtaagagat tgagcctgaa ctctcttagt cataaaaaca tcaaatggcc
721 acatgtccac taccaagctt cttctatgtt aaaaaaataa taataaagca gttttaacct
781 gctaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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