LOCUS BC010708 2169 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens atlastin GTPase 1, mRNA (cDNA clone MGC:9903
IMAGE:3869877), complete cds.
ACCESSION BC010708
VERSION BC010708.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2169)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2169)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC010708.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923444.
FEATURES Location/Qualifiers
source 1..2169
/db_xref="H-InvDB:HIT000035055"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9903 IMAGE:3869877"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2169
/gene="ATL1"
/gene_synonym="AD-FSP"
/gene_synonym="atlastin1"
/gene_synonym="FSP1"
/gene_synonym="GBP3"
/db_xref="GeneID:51062"
/db_xref="HGNC:HGNC:11231"
/db_xref="MIM:606439"
CDS 145..1821
/gene="ATL1"
/gene_synonym="AD-FSP"
/gene_synonym="atlastin1"
/gene_synonym="FSP1"
/gene_synonym="GBP3"
/codon_start=1
/product="atlastin GTPase 1"
/protein_id="AAH10708.2"
/db_xref="GeneID:51062"
/db_xref="HGNC:HGNC:11231"
/db_xref="MIM:606439"
/translation="MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDEH
SFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGD
YNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRDS
ATVFALSTMISSIQVYNLSQNVQEDDLQHLQLCTEYGRLAMEETFLKPFQSLIFLVRD
WSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKV
ATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLVEYFKAYIK
IYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHL
QLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPAT
LFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVID
QVAAALWDQGSTNEALYKLYSAAATHRHLYHQAFPTPKSESTEQSEKKKM"
BASE COUNT 690 a 449 c 476 g 554 t
ORIGIN
1 accagcgcca cagcaacatc ctcagagtct gagcgaactg cgcccagcgc gggcacggag
61 cctcccaccg ccagcaacct gcggccccgg agaaggcagc gagcgcagtg acagcgcctc
121 accgccacca gctcctggac caccatggcc aagaaccgca gggacagaaa cagttggggt
181 ggattttcgg aaaagacata tgaatggagc tcagaagagg aggagccagt gaaaaaggca
241 ggaccagtcc aagtcctcat tgtcaaagat gagcattcct ttgagttaga tgaaactgca
301 ttaaatcgga tccttctctc ggaggctgtc agagacaagg aggttgttgc tgtatctgtt
361 gctggagcat ttagaaaagg aaaatcattc ctgatggact tcatgttgag atacatgtac
421 aaccaggaat cagttgattg ggttggagac tacaatgaac cattgactgg tttttcatgg
481 agaggtggat ctgaacgaga gaccacagga attcagatat ggagtgaaat cttccttatc
541 aataaacctg atggtaaaaa ggttgcagtg ttattgatgg atactcaggg aacctttgat
601 agtcagtcaa ctttgagaga ttcagccaca gtatttgccc ttagcacaat gatcagctca
661 atacaggtat ataacttatc ccaaaatgtc caggaggatg atcttcagca cctccagctt
721 tgcactgagt atggcagact ggcaatggag gaaacattcc tgaagccatt tcagagtctg
781 atatttcttg ttcgagactg gagtttccca tacgaatttt catatggagc cgatggtggt
841 gccaaattct tggaaaaacg cctcaaggtc tcagggaacc agcatgaaga actacagaac
901 gtcagaaaac acatccattc ctgtttcacc aacatttcct gttttctgct acctcatcct
961 ggcttaaaag tagctaccaa tccaaacttt gatggaaaat tgaaagaaat agatgatgaa
1021 ttcatcaaaa acttgaaaat actgattcct tggctactta gtcccgagag cctagatatt
1081 aaagagatca atgggaataa aatcacctgc cggggtctgg tggagtactt caaggcttat
1141 ataaagatct atcaaggtga agaattacca catcccaaat ccatgttaca ggccacagca
1201 gaagctaaca atttagcagc cgtggcaact gccaaggaca catacaacaa aaaaatggaa
1261 gagatttgtg gtggtgacaa accatttctg gccccaaatg acttgcagac caaacacctg
1321 caacttaagg aagaatctgt gaagctattc cgaggggtga agaagatggg tggggaagaa
1381 tttagccggc gttacctgca gcagttggag agtgaaatag atgaacttta catccaatat
1441 atcaagcaca atgatagcaa aaatatcttc catgcagctc gtaccccagc cacactgttt
1501 gtagtcatct ttatcacata tgtgattgct ggtgtgactg gattcattgg tttggacatc
1561 atagctagcc tatgcaatat gataatggga ctgaccctta tcaccctgtg cacttgggca
1621 tatatccggt actctggaga ataccgagag ctgggagctg taatagacca ggtggctgca
1681 gctctgtggg accagggaag tacaaatgag gctttgtaca agctttacag tgcagcagca
1741 acccacagac atctgtatca tcaagctttc cctacaccaa agtcggaatc tactgaacaa
1801 tcagaaaaga aaaaaatgta atgcaaattt taagaaatac aggtgcatga ccaattgtca
1861 attaaatatt cagttttatg tctccatgca aacattcaaa gtgcttccat cagaacggag
1921 taaaatacta aacacctctg aagactgcaa actggattag ttcttttact tcagtgttta
1981 ataagcagat gtatgtatgc atggttatac tattttgtta acatgtacaa tttcctgatt
2041 tttcttcaaa aatgctgtta taaagtattt gtctatttat gataacagta cacgtgttct
2101 gcttgaattt actaaattct actactgggt tataattaaa tcatgtgata ttccaaaaaa
2161 aaaaaaaaa
//