LOCUS BC010691 2018 bp mRNA linear HUM 01-OCT-2007
DEFINITION Homo sapiens solute carrier family 46 (folate transporter), member
1, mRNA (cDNA clone MGC:9564 IMAGE:3872267), complete cds.
ACCESSION BC010691
VERSION BC010691.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543203.
FEATURES Location/Qualifiers
source 1..2018
/db_xref="H-InvDB:HIT000035047"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9564 IMAGE:3872267"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2018
/gene="SLC46A1"
/gene_synonym="HCP1"
/gene_synonym="PCFT"
/db_xref="GeneID:113235"
/db_xref="HGNC:HGNC:30521"
CDS 88..1383
/gene="SLC46A1"
/gene_synonym="HCP1"
/gene_synonym="PCFT"
/codon_start=1
/product="SLC46A1 protein"
/protein_id="AAH10691.1"
/db_xref="GeneID:113235"
/db_xref="HGNC:HGNC:30521"
/translation="MEGSASPPEKPRARPAAAVLCRGPVEPLVFLANFALVLQGPLTT
QYLWHRFSADLGYNGTRQRGGCSNRSADPTMQEVETLTSHWTLYMNVGGFLVGLFSST
LLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCALLGDFGGL
LAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPFWLALAL
LIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFV
VITVHFGAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWV
AEIGLAFNILGMVVFAFATITPLMFTGALFSAVACVNSLAMLTASGIFNSLYPATLNF
MKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP"
BASE COUNT 381 a 653 c 558 g 426 t
ORIGIN
1 gccccacgcc acgcgtcgct ggtcccaggc agcgagtcgc tcgcgcgccc cgccgcccgc
61 ctggcgacag ctccgccgcg cacgcacatg gaggggagcg cgagcccccc ggaaaagccc
121 cgcgcccgcc ctgcggctgc cgtgctgtgc cggggcccgg tagagccgct ggtcttcctg
181 gccaactttg ccttggtcct gcagggcccg ctcaccacgc agtatctgtg gcaccgcttc
241 agcgccgacc tcggctacaa tggcacccgc caaagggggg gctgcagcaa ccgcagcgcg
301 gaccccacca tgcaggaagt ggagaccctt acctcccact ggaccctcta catgaacgtg
361 ggcggcttcc tggtggggct cttctcgtcc accctgctgg gagcttggag cgacagtgtg
421 ggccgccgcc cgctgctagt gctggcctcg ctgggcctgc tgctccaggc cctagtgtcc
481 gtttttgtgg tgcagctgca gctccacgtc ggctacttcg tgctgggtcg catcctttgt
541 gccctcctcg gcgacttcgg tggccttctg gctgctagct ttgcgtccgt ggcagatgtc
601 agctccagtc gcagccgcac cttccggatg gccctgctgg aagccagcat cggggtggct
661 gggatgctgg caagcctcct cgggggccac tggctccggg cccagggtta tgccaacccc
721 ttctggctgg ccttggcctt gctgatagcc atgactctct atgcagcttt ctgctttggt
781 gagaccttaa aggagccaaa gtccacccgg ctcttcacgt tccgtcacca ccgatccatt
841 gtccagctct atgtggctcc cgccccagag aagtccagga aacatttagc cctctactca
901 ctggccatct tcgtggtgat cactgtgcac tttggggccc aggacatctt aaccctttat
961 gaactaagca cacccctctg ctgggactcc aaactaatcg gctatggttc tgcagctcag
1021 catctcccct acctcaccag cctgctggcc ctgaagctcc tgcagtactg cctggccgat
1081 gcctgggtag ctgagatcgg cctggccttc aacatcctgg ggatggtggt ctttgccttt
1141 gccactatca cgcctctcat gttcacaggt gctctctttt ctgctgtggc ctgtgtgaat
1201 agcctggcca tgctgacggc ctccggcatc ttcaactcac tctacccagc cactctgaac
1261 tttatgaagg ggttcccctt cctcctggga gctggcctcc tgctcatccc ggctgttctg
1321 attgggatgc tggaaaaggc tgatcctcac ctcgagttcc agcagtttcc ccagagcccc
1381 tgatctgcct ggaccagaag acagagggca agaggagcaa agtgaacacc aagcaactgg
1441 aggtctgcag ctggaagccc agcccacagc aggacaagca actcttgtct aagggcagtg
1501 ctctctttgg acgaggtagt caagagagac caaggcacca ccccatccac agctgaccca
1561 gcctctgtct aggatctaga atcataaccc acacaggccc actgcaggac aggtggcaga
1621 ggagctattt gggacaggag tcagttctcc ctttctgcta tccatcactt ataaccccac
1681 aggccagagg agaggtcctg agagaggtga cacttcaggg accagaggca gcacgagggc
1741 tggcatctct ccttccagcc caaactgcac agccccaacc aggttcccaa cacgtgtagc
1801 agtcatcagc cattccttaa caatgaatgt ggtacctggt tagtgccagc cttgggaagg
1861 agggagggag gtaagagggg cttggtgatc tctggaggaa gagtgttgcc tttgctgtgg
1921 ttggggaatc gatccttggc tatggcctac ccactcccct ggctgaagag tgccaatcat
1981 tacaaatcag cttcagcaaa ctgaaaaaaa aaaaaaaa
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