LOCUS BC010652 2682 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens per1-like domain containing 1, mRNA (cDNA clone
MGC:9753 IMAGE:3855206), complete cds.
ACCESSION BC010652
VERSION BC010652.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2682)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2682)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45505179.
FEATURES Location/Qualifiers
source 1..2682
/db_xref="H-InvDB:HIT000035033"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9753 IMAGE:3855206"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2682
/gene="PERLD1"
/gene_synonym="AGLA546"
/gene_synonym="CAB2"
/gene_synonym="MGC9753"
/gene_synonym="PP1498"
/db_xref="GeneID:93210"
/db_xref="HGNC:HGNC:23719"
CDS 18..980
/gene="PERLD1"
/gene_synonym="AGLA546"
/gene_synonym="CAB2"
/gene_synonym="MGC9753"
/gene_synonym="PP1498"
/codon_start=1
/product="per1-like domain containing 1"
/protein_id="AAH10652.2"
/db_xref="GeneID:93210"
/db_xref="HGNC:HGNC:23719"
/translation="MAGLAARLVLLAGAAALASGSQGDREPVYRDCVLQCEEQNCSGG
ALNHFRSRQPIYMSLAGWTCRDDCKYECMWVTVGLYLQEGHKVPQFHGKWPFSRFLFF
QEPASAVASFLNGLASLVMLCRYRTFVPASSPMYHTCVAFAWVSLNAWFWSTVFHTRD
TDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIR
FDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSLLELLDFPP
LFWVLDAHAIWHISTIPVHVLFFSFLEDDSLYLLKESEDKFKLD"
BASE COUNT 480 a 795 c 797 g 610 t
ORIGIN
1 cgagccaggg agaaaggatg gccggcctgg cggcgcggtt ggtcctgcta gctggggcag
61 cggcgctggc gagcggctcc cagggcgacc gtgagccggt gtaccgcgac tgcgtactgc
121 agtgcgaaga gcagaactgc tctgggggcg ctctgaatca cttccgctcc cgccagccaa
181 tctacatgag tctagcaggc tggacctgtc gggacgactg taagtatgag tgtatgtggg
241 tcaccgttgg gctctacctc caggaaggtc acaaagtgcc tcagttccat ggcaagtggc
301 ccttctcccg gttcctgttc tttcaagagc cggcatcggc cgtggcctcg tttctcaatg
361 gcctggccag cctggtgatg ctctgccgct accgcacctt cgtgccagcc tcctccccca
421 tgtaccacac ctgtgtggcc ttcgcctggg tgtccctcaa tgcatggttc tggtccacag
481 ttttccacac cagggacact gacctcacag agaaaatgga ctacttctgt gcctccactg
541 tcatcctaca ctcaatctac ctgtgctgcg tcaggaccgt ggggctgcag cacccagctg
601 tggtcagtgc cttccgggct ctcctgctgc tcatgctgac cgtgcacgtc tcctacctga
661 gcctcatccg cttcgactat ggctacaacc tggtggccaa cgtggctatt ggcctggtca
721 acgtggtgtg gtggctggcc tggtgcctgt ggaaccagcg gcggctgcct cacgtgcgca
781 agtgcgtggt ggtggtcttg ctgctgcagg ggctgtccct gctcgagctg cttgacttcc
841 caccgctctt ctgggtcctg gatgcccatg ccatctggca catcagcacc atccctgtcc
901 acgtcctctt tttcagcttt ctggaagatg acagcctgta cctgctgaag gaatcagagg
961 acaagttcaa gctggactga agaccttgga gcgagtctgc cccagtgggg atcctgcccc
1021 cgccctgctg gcctcccttc tcccctcaac ccttgagatg attttctctt ttcaacttct
1081 tgaacttgga catgaaggat gtgggcccag aatcatgtgg ccagcccacc ccctgttggc
1141 cctcaccagc cttggagtct gttctaggga aggcctccca gcatctggga ctcgagagtg
1201 ggcagcccct ctacctcctg gagctgaact ggggtggaac tgagtgtgct cttagctcta
1261 ccgggaggac agctgcctgt ttcctcccca tcagcctcct ccccacatcc ccagctgcct
1321 ggctgggtcc tgaagccctc tgtctacctg ggagaccagg gaccacaggc cttagggata
1381 cagggggtcc ccttctgtta ccacccccca ccctcctcca ggacaccact aggtggtgct
1441 ggatgcttgt tctttggcca gccaaggttc acggcgattc tccccatggg atcttgaggg
1501 accaagctgc tgggattggg aaggagtttc accctgacca ttgccctagc caggttccca
1561 ggaggcctca ccatactccc tttcagggcc agggctccag caagcccagg gcaaggatcc
1621 tgtgctgctg tctggttgag agcctgccac cgtgtgtcgg gagtgtgggc caggctgagt
1681 gcataggtga cagggccgtg agcatgggcc tgggtgtgtg tgagctcagg cctaggtgcg
1741 cagtgtggag acgggtgttg tcggggaaga ggtgtggctt caaagtgtgt gtgtgcaggg
1801 ggtgggtgtg ttagcgtggg ttaggggaac gtgtgtgcgc gtgctggtgg gcatgtgaga
1861 tgagtgactg ccggtgaatg tgtccacagt tgagaggttg gagcaggatg agggaatcct
1921 gtcaccatca ataatcactt gtggagcgcc agctctgccc aaggcgccac ctgggcggac
1981 agccaggagc tctccatggc caggctgcct gtgtgcatgt tccctgtctg gtgccccttt
2041 gcccgcctcc tgcaaacctc acagggtccc cacacaacag tgccctccag aagcagcccc
2101 tcggaggcag aggaaggaaa atggggatgg ctggggctct ctccatcctc cttttctcct
2161 tgccttcgca tggctggcct tcccctccaa aacctccatt cccctgctgc cagccccttt
2221 gccatagcct gattttgggg aggaggaagg ggcgatttga gggagaaggg gagaaagctt
2281 atggctgggt ctggtttctt cccttcccag agggtcttac tgttccaggg tggccccagg
2341 gcaggcaggg gccacactat gcctgcgccc tggtaaaggt gacccctgcc atttaccagc
2401 agccctggca tgttcctgcc ccacaggaat agaatggagg gagctccaga aactttccat
2461 cccaaaggca gtctccgtgg ttgaagcaga ctggattttt gctctgcccc tgaccccttg
2521 tccctctttg agggagggga gctatgctag gactccaacc tcagggactc gggtggcctg
2581 cgctagcttc ttttgatact gaaaactttt aaggtgggag ggtggcaagg gatgtgctta
2641 ataaatcaat tccaagcctc aaaaaaaaaa aaaaaaaaaa aa
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