LOCUS BC010630 2896 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class VI, type 11B, mRNA (cDNA clone
IMAGE:3853179), partial cds.
ACCESSION BC010630
VERSION BC010630.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2896)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2896)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: a Column: 13.
FEATURES Location/Qualifiers
source 1..2896
/db_xref="H-InvDB:HIT000087525"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3853179"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2896
/gene="ATP11B"
/gene_synonym="ATPIF"
/gene_synonym="ATPIR"
/gene_synonym="DKFZP434J238"
/gene_synonym="DKFZP434N1615"
/db_xref="GeneID:23200"
/db_xref="HGNC:HGNC:13553"
/db_xref="MIM:605869"
CDS <1..1040
/gene="ATP11B"
/gene_synonym="ATPIF"
/gene_synonym="ATPIR"
/gene_synonym="DKFZP434J238"
/gene_synonym="DKFZP434N1615"
/codon_start=3
/product="ATP11B protein"
/protein_id="AAH10630.1"
/db_xref="GeneID:23200"
/db_xref="HGNC:HGNC:13553"
/db_xref="MIM:605869"
/translation="RIGIVFIGNSEETMEVKTLGKLERYKLLHILEFDSDRRRMSVIV
QAPSGEKLLFAKGAESSILPKCIGGEIEKTRIHVDEFALKGLRTLCIAYRKFTSKEYE
EIDKRIFEARTALQQREEKLAAVFQFIEKDLILLGATAVEDRLQDKVRETIEALRMAG
IKVWVLTGDKHETAVSVSLSCGHFHRTMNILELINQKSDSECAEQLRQLARRITEDHV
IQHGLVVDGTSLSLALREHEKLFMEVCRNCSAVLCCRMAPLQKAKVIRLIKISPEKPI
TLAVGDGANDVSMIQEAHVGIGIMGKEGRQAARNSDYAIARFKFLSKLLFVHGHFYYI
RIATLVQYFFL"
BASE COUNT 891 a 497 c 570 g 938 t
ORIGIN
1 caaggattgg tattgtgttt attggcaatt ctgaagaaac tatggaggtt aaaactcttg
61 gaaaactgga acggtacaaa ctgcttcata ttctggaatt tgattcagat cgtaggagaa
121 tgagtgtaat tgttcaggca ccttcaggtg agaagttatt atttgctaaa ggagctgagt
181 catcaattct ccctaaatgt ataggtggag aaatagaaaa aaccagaatt catgtagatg
241 aatttgcttt gaaagggcta agaactctgt gtatagcata tagaaaattt acatcaaaag
301 agtatgagga aatagataaa cgcatatttg aagccaggac tgccttgcag cagcgggaag
361 agaaattggc agctgttttc cagttcatag agaaagacct gatattactt ggagccacag
421 cagtagaaga cagactacaa gataaagttc gagaaactat tgaagcattg agaatggctg
481 gtatcaaagt atgggtactt actggggata aacatgaaac agctgttagt gtgagtttat
541 catgtggcca ttttcataga accatgaaca tccttgaact tataaaccag aaatcagaca
601 gcgagtgtgc tgaacaattg aggcagcttg ccagaagaat tacagaggat catgtgattc
661 agcatgggct ggtagtggat gggaccagcc tatctcttgc actcagggag catgaaaaac
721 tatttatgga agtttgcaga aattgttcag ctgtattatg ctgtcgtatg gctccactgc
781 agaaagcaaa agtaataaga ctaataaaaa tatcacctga gaaacctata acattggctg
841 ttggtgatgg tgctaatgac gtaagcatga tacaagaagc ccatgttggc ataggaatca
901 tgggtaaaga aggaagacag gctgcaagaa acagtgacta tgcaatagcc agatttaagt
961 tcctctccaa attgcttttt gttcatggtc atttttatta tattagaata gctacccttg
1021 tacagtattt ttttttataa gaatgtgtgc tttatcacac cccagttttt atatcagttc
1081 tactgtttgt tttctcagca aacattgtat gacagcgtgt acctgacttt atacaatatt
1141 tgttttactt ccctacctat tctgatatat agtcttttgg aacagcatgt agaccctcat
1201 gtgttacaaa ataagcccac cctttatcga gacattagta aaaaccgcct cttaagtatt
1261 aaaacatttc tttattggac catcctgggc ttcagtcatg cctttatttt cttttttgga
1321 tcctatttac taatagggaa agatacatct ctgcttggaa atggccagat gtttggaaac
1381 tggacatttg gcactttggt cttcacagtc atggttatta cagtcacagt aaagatggct
1441 ctggaaactc atttttggac ttggatcaac catctcgtta cctggggatc tattatattt
1501 tattttgtat tttccttgtt ttatggaggg attctctggc catttttggg ctcccagaat
1561 atgtattttg tgtttattca gctcctgtca agtggttctg cttggtttgc cataatcctc
1621 atggttgtta catgtctatt tcttgatatc ataaagaagg tctttgaccg acacctccac
1681 cctacaagta ctgaaaaggc acagcttact gaaacaaatg caggtatcaa gtgcttggac
1741 tccatgtgct gtttcccgga aggagaagca gcgtgtgcat ctgttggaag aatgctggaa
1801 cgagttatag gaagatgtag tccaacccac atcagcagat catggagtgc atcggatcct
1861 ttctatacca acgacaggag catcttgact ctctccacaa tggactcatc tacttgttaa
1921 aggggcagta gtactttgtg ggagccagtt cacctccttt cctaaaattc agtgtgatca
1981 ccctgttaat ggccacacta gctctgaaat taatttccaa aatctttgta gtagttcata
2041 cccactcaga gttataatgg caaacaaaca gaaagcatta gtacaagccc ctcccaacac
2101 ccttaatttg aatctgaaca tgttaaaatt tgagaataaa gagacatttt tcatctcttt
2161 gtctggtttg tcccttgtgc ttatgggact cctaatggca tttcagtctg ttgctgaggc
2221 cattatattt taatataaat gtagaaaaaa gagagaaatc ttagtaaaga gtatttttta
2281 gtattagctt gattattgac tcttctattt aaatctgctt ctgtaaatta tgctgaaagt
2341 ttgccttgag aactctattt ttttattaga gttatattta aagcttttca tgggaaaagt
2401 taatgtgaat actgaggaat tttggtccct cagtgacctg tgttgttaat tcattaatgc
2461 attctgagtt cacagagcaa attaggagaa tcatttccaa ccattattta ctgcagtatg
2521 gggagtaaat ttataccaat tcctctaact gtactgtaac acagcctgta aagttagcca
2581 tataaatgca agggtatatc atatatacaa atcaggaatc aggtccgttc accgaacttc
2641 aaattgatgt ttactaatat ttttgtgaca gagtataaag accctatagt gggtaaatta
2701 gatactatta gcatattatt aatttaatgt ctttatcatt ggatcttttg catgctttaa
2761 tctggttaac atatttaaat ttgctttttt tctctttacc tgaaggctct gtgtatagta
2821 tttcatgaca tcgttgtaca gtttaactat atcaataaaa agtttggaca gtaaaaaaaa
2881 aaaaaaaaaa aaaaaa
//