LOCUS BC010565 1452 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens leucine-rich repeats and calponin homology (CH) domain
containing 3, mRNA (cDNA clone IMAGE:4152627), partial cds.
ACCESSION BC010565
VERSION BC010565.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1452)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1452)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1452
/db_xref="H-InvDB:HIT000087514"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4152627"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1452
/gene="LRCH3"
/gene_synonym="MGC4126"
/db_xref="GeneID:84859"
CDS <1..612
/gene="LRCH3"
/gene_synonym="MGC4126"
/codon_start=1
/product="LRCH3 protein"
/protein_id="AAH10565.1"
/db_xref="GeneID:84859"
/translation="DRPNALLSSPATETVHHSPAYSFPAAIQRNQPQRPESFLFRAGV
RAETNKGHASPLPPSAAPTTDSTDSITGQNSRQREEELELIDQLRKHIEYRLKVSLPC
DLGAALTDGVVLCHLANHVRPRSVPSIHVPSPAVPKLTMAKCRRNVENFLEACRKIGV
PQEQLCLPLHILEEKGLSQVAVTVQALLELAPPKQQQHQLSAV"
BASE COUNT 397 a 347 c 311 g 397 t
ORIGIN
1 gacagaccta atgctctatt aagttcacct gcaacagaaa cagttcatca ttcccctgca
61 tattcttttc ctgctgctat ccagagaaat cagcctcagc gccctgaaag cttccttttc
121 cgagcaggtg tcagggcaga aaccaacaaa ggtcatgctt caccccttcc tccatctgct
181 gcacctacca ctgattctac agattccata acaggacaga attcaagaca gagagaagaa
241 gagctggaat taatagacca actgcgtaaa catattgagt accggttgaa agtgtctcta
301 ccttgtgatc tcggagcagc tctaactgac ggtgttgttc tttgccattt ggccaatcat
361 gtgcgacctc gatctgtccc aagcattcat gttccctcac cagctgtacc taaattaaca
421 atggcgaaat gcaggcgaaa tgtggaaaat ttcctagaag cttgcagaaa aattggtgta
481 cctcaggagc aattatgttt gcctctccac attttagaag agaaaggttt gagccaggtt
541 gcagtgacgg tccaggctct cctggaactt gccccaccca agcaacagca gcaccagtta
601 tctgctgttt gaggatcccc aggacggtgg gcactggcct ggccaaaaca aggaacagga
661 caccgtgatt gctgctgcca gctgtctgct taaacaaagc tcttgtgtgt tctcagaagg
721 gaccgttccc atgattccta acaggaatat tttgcttcat ttctccattt taggggaggt
781 tatttccatt tccattgaat ttttttacga agacaccatt ggttttctca gatgaaactt
841 ctcttactga aaacccagca cctaacttgg ctgtgttttc ctggagagca ggcgtgtttc
901 acgtgccaga aagcacatct tctgtgttag gcacaagcat gctgtgccat tgtttttacc
961 tggtctcaag acaactggtc tgctggtttc taaacttggt tgttcattag actctcctgg
1021 agtatttgtt aaaatacaga ttcacattca gtagagctgg ggtaaggcct aggaatctgc
1081 attttcaaca accattgcac atgtttttgt ttttgttgga gaattgcttg aacccaggag
1141 gcggaggttg tggtgagccg agatcgtgcc attgcacccc agcctgggca acaaaagcga
1201 aattccatct caaaaaaaga aaacgcgccc catctcgctc caccacaagc gcctttatat
1261 actcaatgat gggtggagga aaagggccca agggctcaca ccgcacagga gcctttactc
1321 aagtttcagc tagttttcct tcccctgcat tttgaactcc ttttagttgt tggtgatatc
1381 ctttggtgtt cactgccttt gtaaaacaag taaataaagt aagcggaaga taaaaaaaaa
1441 aaaaaaaaaa aa
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