LOCUS BC010536 2447 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coxsackie virus and adenovirus receptor, mRNA (cDNA
clone MGC:17118 IMAGE:3456544), complete cds.
ACCESSION BC010536
VERSION BC010536.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2447)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2447)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45827793.
FEATURES Location/Qualifiers
source 1..2447
/db_xref="H-InvDB:HIT000034986"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17118 IMAGE:3456544"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2447
/gene="CXADR"
/gene_synonym="CAR"
/gene_synonym="HCAR"
/db_xref="GeneID:1525"
/db_xref="HGNC:HGNC:2559"
/db_xref="MIM:602621"
CDS 76..1173
/gene="CXADR"
/gene_synonym="CAR"
/gene_synonym="HCAR"
/codon_start=1
/product="coxsackie virus and adenovirus receptor"
/protein_id="AAH10536.1"
/db_xref="GeneID:1525"
/db_xref="HGNC:HGNC:2559"
/db_xref="MIM:602621"
/translation="MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFT
LSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGD
ASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKI
KCEPKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRV
GSDQCLLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHD
IREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPT
LPPAKVAAPNLSRMGAIPVMIPAQSKDGSIV"
BASE COUNT 742 a 447 c 498 g 760 t
ORIGIN
1 gcgaggcgcg gggagcctgg gaccaggagc gagagccgcc tacctgcagc cgccgcccac
61 ggcacggcag ccaccatggc gctcctgctg tgcttcgtgc tcctgtgcgg agtagtggat
121 ttcgccagaa gtttgagtat cactactcct gaagagatga ttgaaaaagc caaaggggaa
181 actgcctatc tgccgtgcaa atttacgctt agtcccgaag accagggacc gctggacatc
241 gagtggctga tatcaccagc tgataatcag aaggtggatc aagtgattat tttatattct
301 ggagacaaaa tttatgatga ctactatcca gatctgaaag gccgagtaca ttttacgagt
361 aatgatctca aatctggtga tgcatcaata aatgtaacga atttacaact gtcagatatt
421 ggcacatatc agtgcaaagt gaaaaaagct cctggtgttg caaataagaa gattcatctg
481 gtagttcttg ttaagccttc aggtgcgaga tgttacgttg atggatctga agaaattgga
541 agtgacttta agataaaatg tgaaccaaaa gaaggttcac ttccattaca gtatgagtgg
601 caaaaattgt ctgactcaca gaaaatgccc acttcatggt tagcagaaat gacttcatct
661 gttatatctg taaaaaatgc ctcttctgag tactctggga catacagctg tacagtcaga
721 aacagagtgg gctctgatca gtgcctgttg cgtctaaacg ttgtccctcc ttcaaataaa
781 gctggactaa ttgcaggagc cattatagga actttgcttg ctctagcgct cattggtctt
841 atcatctttt gctgtcgtaa aaagcgcaga gaagaaaaat atgaaaagga agttcatcac
901 gatatcaggg aagatgtgcc acctccaaag agccgtacgt ccactgccag aagctacatc
961 ggcagtaatc attcatccct ggggtccatg tctccttcca acatggaagg atattccaag
1021 actcagtata accaagtacc aagtgaagac tttgaacgca ctcctcagag tccgactctc
1081 ccacctgcta aggtagctgc ccctaatcta agtcgaatgg gtgcgattcc tgtgatgatt
1141 ccagcacaga gcaaggatgg gtctatagta tagagcctcc atatgtctca tctgtgctct
1201 ccgtgttcct ttcctttttt tgatatatga aaacctattc tggtctaaat tgtgttacta
1261 gcctcaaaat acatcaaaaa ataagttaat caggaactgt acggaatata tttttaaaaa
1321 tttttgtttg gttatatcga aatagttaca ggcactaaag ttagtaaaga aaagtttacc
1381 atctgaaaaa gctggatttt ctttaagagg ttgattataa agttttctaa atttatcagt
1441 acctaagtaa gatgtagcgc tttgaatatg aaatcatagg tgaagacatg ggtgaactta
1501 cttgcatacc aagttgatac ttgaataacc atctgaaagt ggtacttgat catttttacc
1561 attattttta ggatgtgtat ttcatttatt tatggcccac cagtctcccc caaattagta
1621 cagaaatatc catgacaaaa ttacttacgt atgtttgtac ttggttttac agctcctttg
1681 aaaactctgt gtttggaata tctctaaaaa catagaaaac actacagtgg tttagaaatt
1741 actaatttta cttctaagtc attcataaac cttgtctatg aaatgacttc ttaaatattt
1801 agttgataga ctgctacagg taatagggac ttagcaagct cttttatatg ctaaaggagc
1861 atctatcaga ttaagttaga acatttgctg tcagccacat attgagatga cactaggtgc
1921 aatagcaggg atagattttg ttggtgagta gtctcatgcc ttgagatctg tggtggtctt
1981 caaaatggtg gccagccaga tcaaggatgt agtatctcat agttcccagg tgatattttt
2041 cttattagaa aaatattata actcatttgt tgtttgacac ttatagattg aaatttccta
2101 atttattcta aattttaagt ggttctttgg ttccagtgct ttatgttgtt gttgtttttg
2161 gatggtgtta catattatat gttctagaaa catgtaatcc taaatttacc ctcttgaata
2221 taatccctgg atgatatttt ttatcataaa tgcagaataa tcaaatacat tttaagcaag
2281 ttaagtgtcc tccatcaatt ctgtattcca gacttgggag gatgtacagt tgctgttgtg
2341 tgatcaaaca tgtctctgtg tagttccagc aaatcaagct gagctttgaa aaagtttgtc
2401 ttagttttgt gaaggtgatt tattcttaaa aaaaaaaaaa aaaaaaa
//