LOCUS BC010417 1087 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens actin, gamma 1, mRNA (cDNA clone IMAGE:4053240),
partial cds.
ACCESSION BC010417
VERSION BC010417.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1087)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1087)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC010417.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: o Column: 5.
FEATURES Location/Qualifiers
source 1..1087
/db_xref="H-InvDB:HIT000087488"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4053240"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1087
/gene="ACTG1"
/gene_synonym="ACTG"
/gene_synonym="DFNA20"
/gene_synonym="DFNA26"
/db_xref="GeneID:71"
/db_xref="MIM:102560"
CDS <1..500
/gene="ACTG1"
/gene_synonym="ACTG"
/gene_synonym="DFNA20"
/gene_synonym="DFNA26"
/codon_start=3
/product="ACTG1 protein"
/protein_id="AAH10417.2"
/db_xref="GeneID:71"
/db_xref="MIM:102560"
/translation="DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER
FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR
MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV
HRKCF"
misc_feature 3..497
/gene="ACTG1"
/gene_synonym="ACTG"
/gene_synonym="DFNA20"
/gene_synonym="DFNA26"
/note="actin; Region: Actin"
/db_xref="CDD:pfam00022"
BASE COUNT 270 a 268 c 271 g 278 t
ORIGIN
1 gcgacatcaa ggagaagctg tgctacgtcg ccctggactt cgagcaggag atggccaccg
61 ccgcatcctc ctcttctctg gagaagagct acgagctgcc cgatggccag gtcatcacca
121 ttggcaatga gcggttccgg tgtccggagg cgctgttcca gccttccttc ctgggtatgg
181 aatcttgcgg catccacgag accaccttca actccatcat gaagtgtgac gtggacatcc
241 gcaaagacct gtacgccaac acggtgctgt cgggcggcac caccatgtat ccgggcattg
301 ccgacaggat gcagaaggag atcaccgccc tggcgcccag caccatgaag atcaagatca
361 tcgcaccccc agagcgcaag tactcggtgt ggatcggtgg ctccatcctg gcctcactgt
421 ccaccttcca gcagatgtgg attagcaagc aggagtacga cgagtcgggc ccctccatcg
481 tccaccgcaa atgcttctaa acggactcag cagatgcgta gcatttgctg catgggttaa
541 ttgagaatag aaatttgccc ctggcaaatg cacacacctc atgctagcct cacgaaactg
601 gaataagcct tcgaaaagaa attgtccttg aagcttgtat ctgatatcag cactggattg
661 tagaacttgt tgctgatttc gaccttgtat tgaagttaac tgttcccctt ggtattaacg
721 tgtcagggct gagtgttctg ggatttctct agaggctggc aagaaccagt tgttttgtct
781 tgcgggtctg tcagggttgg aaagtccaag ccgtaggacc cagtttcctt tcttagctga
841 tgtctttggc cagaacaccg tgggctgtta cttgctttga gttggaagcg gtttgcattt
901 acgcctgtaa atgtattcat tcttaattta tgtaaggttt tttttgtacg caattctcga
961 ttctttgaag agatgacaac aaattttggt tttctactgt tatgtgagaa cattaggccc
1021 cagcaacacg tcattgtgta aggaaaaata aaagtgctgc cgtaaccaaa aaaaaaaaaa
1081 aaaaaaa
//