LOCUS BC010358 2209 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cytochrome P450, family 39, subfamily A, polypeptide
1, mRNA (cDNA clone MGC:13370 IMAGE:4334109), complete cds.
ACCESSION BC010358
VERSION BC010358.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2209)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2209)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32313586.
FEATURES Location/Qualifiers
source 1..2209
/db_xref="H-InvDB:HIT000034895"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13370 IMAGE:4334109"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2209
/gene="CYP39A1"
/db_xref="GeneID:51302"
/db_xref="HGNC:HGNC:17449"
/db_xref="MIM:605994"
CDS 209..1618
/gene="CYP39A1"
/codon_start=1
/product="cytochrome P450, family 39, subfamily A,
polypeptide 1"
/protein_id="AAH10358.1"
/db_xref="GeneID:51302"
/db_xref="HGNC:HGNC:17449"
/db_xref="MIM:605994"
/translation="MELISPTVIIILGCLALFLLLQPKNLRRPPCIKGWIPWIGVGFE
FGKAPLEFIEKARIKYGPIFTVFAMGNRMTFVTEEEGINVFLKSKKVDFELAVQNIVY
RTASIPKNVFLALHEKLYIMLKGKMGTVNLHQFTGQLTEELHEQLENLGTHGTMDLNN
LVRHLLYPVTVNMLFNKSLFSTNKKKIKEFHQYFQVYDEDFEYGSQLPECLLRNWSKS
KKWFLELFEKNIPDIKACKSAKDNSMTLLQATLDIVETETSKENSPNYGLLLLWASLS
NAVPVAFWTLAHVLSHPDIHKAIMEGISSVFGKAGKDKIKVSEDDLENLLLIKWCVLE
TIRLKAPGVITRKVVKPVEILNYIIPSGDLLMLSPFWLHRNPKYFPEPELFKPERWKK
ANLEKHSFLDCFMAFGSGKFQCPARWFALLEVQMCIILILYKYDCSLLDPLPKQSYLH
LVGVPQPEGQCRIEYKQRI"
BASE COUNT 719 a 390 c 458 g 642 t
ORIGIN
1 gggggaagtg gaggtgggag ggagcgacaa tggaaaaatc acctgaaaac tgggacagag
61 gaaggaagct acagttacga aggagagctg caaaagttgc agcagaaagg ttgggagtcc
121 cgacaggttc cgtagcccac agaaaagaag caagggacgg caggactgtt tcacactttt
181 ctgcttctgg aaggtgctgg acaaaaacat ggaactaatt tccccaacag tgattataat
241 cctgggttgc cttgctctgt tcttactcct tcagccgaag aatttgcgta gacccccgtg
301 catcaagggc tggattcctt ggattggagt tggatttgag tttgggaaag cccctctaga
361 atttatagag aaagcaagaa tcaagtatgg accaatattt acagtctttg ctatgggaaa
421 ccgaatgacc tttgttactg aagaagaagg aattaatgtg tttctaaaat ccaaaaaagt
481 agattttgaa ctagcagtgc aaaatatcgt ttatcgtaca gcatcaattc caaagaatgt
541 ctttttagca ctgcatgaaa aactctatat tatgttgaaa gggaaaatgg ggactgtcaa
601 tctccatcag tttactgggc aactgactga agaattacat gaacaactgg agaatttagg
661 cactcatggg acaatggacc tgaacaactt agtaagacat ctcctttatc cagtcacagt
721 gaatatgctc tttaataaaa gtttgttttc cacaaacaag aaaaaaatca aggagttcca
781 tcagtatttt caagtttatg atgaagattt tgagtatggg tcccagttgc cagagtgtct
841 tctaagaaac tggtcaaaat ccaaaaagtg gttcctggaa ctgtttgaga aaaacattcc
901 agatataaaa gcatgtaaat ctgcaaaaga taattccatg acattattgc aagctacgct
961 ggatattgta gagacggaaa caagtaagga aaactcaccc aattatgggc tcttactgct
1021 ttgggcttct ctgtctaatg ctgttcctgt tgcattttgg acacttgcac acgtcctttc
1081 tcatcctgat atccacaagg ccattatgga aggcatatct tctgtgtttg gcaaagcagg
1141 caaagataag attaaagtgt ctgaggatga cctggagaat ctccttctaa ttaaatggtg
1201 tgttttggaa accattcgtt taaaagctcc tggtgtcatt actagaaaag tggtgaagcc
1261 tgtggaaatt ttgaattaca tcattccttc tggtgacttg ttgatgttgt ctccattttg
1321 gctgcataga aatccaaagt attttcctga gcctgaattg ttcaaacctg aacgttggaa
1381 aaaggcaaat ttagagaagc actctttctt ggactgcttc atggcatttg gaagcgggaa
1441 gttccagtgt cctgcaaggt ggtttgctct gttagaggtt cagatgtgta ttattttaat
1501 actttataaa tatgactgta gtcttctgga cccattaccc aaacagagtt atctccattt
1561 ggtgggtgtc ccccagccgg aagggcaatg ccgaattgaa tataaacaaa gaatatgaca
1621 tctgttgggc ctcacaagga ccagggcctt ctggaggagt ggcactaccc cacctggcag
1681 cacctagacc tgagctctac aaaaacacac tgcttcactt tgttttagga cttagttcaa
1741 gaacacattc aaatggtgca tgtgtttggt atcttcaaca gtagaccaag aatctaacat
1801 cactctcagt aatatagaga ccggaataca tggtttatag gaaatgatca aatgatccaa
1861 aaaaactcca cattttttaa gaagttggaa tttgatttca tgcataactg tattaaaaca
1921 ttaaatagaa ataatgtcat ttgaatgaaa atcttatcac attaaattca ctgtgaaggc
1981 agcatactta aatttttatt ttgaaaagtc taaaaggctt agatttttaa aatttaataa
2041 ttatttctac aaattttcta tttttcttga ggtgattctc aactagcaat tggaactcct
2101 aggctctatt aacataattc tttattgtaa acgtatctaa tgctaaaagt aataaaatgg
2161 tagttttctg agacctgcga aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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