LOCUS BC010354 1968 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens growth hormone inducible transmembrane protein, mRNA
(cDNA clone MGC:13359 IMAGE:4093037), complete cds.
ACCESSION BC010354
VERSION BC010354.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1968)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1968)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: e Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657479.
FEATURES Location/Qualifiers
source 1..1968
/db_xref="H-InvDB:HIT000034892"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13359 IMAGE:4093037"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1968
/gene="GHITM"
/gene_synonym="DERP2"
/gene_synonym="HSPC282"
/gene_synonym="My021"
/gene_synonym="PTD010"
/gene_synonym="TMBIM5"
/db_xref="GeneID:27069"
/db_xref="HGNC:HGNC:17281"
CDS 76..1113
/gene="GHITM"
/gene_synonym="DERP2"
/gene_synonym="HSPC282"
/gene_synonym="My021"
/gene_synonym="PTD010"
/gene_synonym="TMBIM5"
/codon_start=1
/product="growth hormone inducible transmembrane protein"
/protein_id="AAH10354.1"
/db_xref="GeneID:27069"
/db_xref="HGNC:HGNC:17281"
/translation="MLAARLVCLRTLPSRVFHPAFTKASPVVKNSITKNQWLLTPSRE
YATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWFVAGGAAVGLGALCYYGLG
LSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSW
VTIGVTFAAMVGAGMLVRSIPYDQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIRA
AWYTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLY
SVAMYGGLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVA
TMLATGGNRKK"
BASE COUNT 558 a 362 c 454 g 594 t
ORIGIN
1 ggggaaactg cgaggcgaag gtgaccgggg accgagcatt tcagatctgc tcggtagacc
61 tggtgcacca ccaccatgtt ggctgcaagg ctggtgtgtc tccggacact accttctagg
121 gttttccacc cagctttcac caaggcctcc cctgttgtga agaattccat cacgaagaat
181 caatggctgt taacacctag cagggaatat gccaccaaaa caagaattgg gatccggcgt
241 gggagaactg gccaagaact caaagaggca gcattggaac catcgatgga aaaaatattt
301 aaaattgatc agatgggaag atggtttgtt gctggagggg ctgctgttgg tcttggagca
361 ttgtgctact atggcttggg actgtctaat gagattggag ctattgaaaa ggctgtaatt
421 tggcctcagt atgtcaagga tagaattcat tccacctata tgtacttagc agggagtatt
481 ggtttaacag ctttgtctgc catagcaatc agcagaacgc ctgttctcat gaacttcatg
541 atgagaggct cttgggtgac aattggtgtg acctttgcag ccatggttgg agctggaatg
601 ctggtacgat caataccata tgaccagagc ccaggcccaa agcatcttgc ttggttgcta
661 cattctggtg tgatgggtgc agtggtggct cctctgacaa tattaggggg tcctcttctc
721 atcagagctg catggtacac agctggcatt gtgggaggcc tctccactgt ggccatgtgt
781 gcgcccagtg aaaagtttct gaacatgggt gcacccctgg gagtgggcct gggtctcgtc
841 tttgtgtcct cattgggatc tatgtttctt ccacctacca ccgtggctgg tgccactctt
901 tactcagtgg caatgtacgg tggattagtt cttttcagca tgttccttct gtatgatacc
961 cagaaagtaa tcaagcgtgc agaagtatca ccaatgtatg gagttcaaaa atatgatccc
1021 attaactcga tgctgagtat ctacatggat acattaaata tatttatgcg agttgcaact
1081 atgctggcaa ctggaggcaa cagaaagaaa tgaagtgact cagcttctgg cttctctgct
1141 acatcaaata tcttgtttaa tggggcagat atgcattaaa tagtttgtac aagcagcttt
1201 cgttgaagtt tagaagataa gaaacatgtc atcatattta aatgttccgg taatgtgatg
1261 cctcaggtct gccttttttt ctggagaata aatgcagtaa tcctctccca aataagcaca
1321 cacattttca attctcatgt ttgagtgatt ttaaaatgtt ttggtgaatg tgaaaactaa
1381 agtttgtgtc atgagaatgt aagtcttttt tctactttaa aatttagtag gttcactgag
1441 taactaaaat ttagcaaacc tgtgtttgca tatttttttg gagtgcagaa tattgtaatt
1501 aatgtcataa gtgatttgga gctttggtaa agggaccaga gagaaggagt cacctgcagt
1561 cttttgtttt tttaaatact tagaacttag cacttgtgtt attgattagt gaggagccag
1621 taagaaacat ctgggtattt ggaaacaagt ggtcattgtt acattcatct gctgaactta
1681 acaaaactgt tcatcctgaa acaggcacag gtgatgcatt ctcctgctgt tgcttctcag
1741 tgctctcttt ccaatataga tgtggtcatg tttgacttgt acagaatgtt aatcatacag
1801 agaatccttg atggaattat atatgtgtgt tttacttttg aatgttacaa aaggaaataa
1861 ctttaaaact attctcaaga gaaaatattc aaagcatgaa atatgttgct ttttccagaa
1921 tacaaacagt atactcatgt aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//