LOCUS BC010235 2254 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polycomb group ring finger 6, mRNA (cDNA clone
MGC:17541 IMAGE:3461513), complete cds.
ACCESSION BC010235
VERSION BC010235.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2254)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2254)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: b Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58761529.
FEATURES Location/Qualifiers
source 1..2254
/db_xref="H-InvDB:HIT000034867"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17541 IMAGE:3461513"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2254
/gene="PCGF6"
/gene_synonym="MBLR"
/gene_synonym="MGC15678"
/gene_synonym="MGC17541"
/db_xref="GeneID:84108"
/db_xref="HGNC:HGNC:21156"
/db_xref="MIM:607816"
CDS 69..1127
/gene="PCGF6"
/gene_synonym="MBLR"
/gene_synonym="MGC15678"
/gene_synonym="MGC17541"
/codon_start=1
/product="polycomb group ring finger 6"
/protein_id="AAH10235.1"
/db_xref="GeneID:84108"
/db_xref="HGNC:HGNC:21156"
/db_xref="MIM:607816"
/translation="MEGVAVVTAGSVGAAKTEGAAALPPPPPPPVSPPALTPAPAAGE
EGPAPLSETGAPGCSGSRPPELEPERSLGRFRGRFEDEDEELEEEEELEEEEEEEEED
MSHFSLRLEGGRQDSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSC
IVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKE
RGLEVPKPAVPQPVPSSKGRSKKVLESVFRIPPELDMSLLLEFIGANEGTGHFKPLEK
KFVRVSGEATIGHVEKFLRRKMGLDPACQVDIICGDHLLEQYQTLREIRRAIGDAAMQ
DGLLVLHYGLVVSPLKIT"
BASE COUNT 657 a 431 c 511 g 655 t
ORIGIN
1 ggcgtccgag gccggccgaa ctcccgcgct ctcccgccgc ctcgcctcgc ctggtgtctc
61 tcccgaccat ggagggggtc gcggtggtga cggcgggcag cgtaggcgct gccaaaaccg
121 agggagctgc agccttgccg cctccgcctc cgcctcctgt ctccccgccc gccctcaccc
181 ctgcacccgc agcgggtgag gagggaccgg cgcctctgtc tgagacgggg gctcccggct
241 gctccggctc ccggccccct gagctggagc cggagcgcag cctgggccgc ttcagaggcc
301 gcttcgagga cgaggacgag gagttggaag aagaagagga gctggaggag gaagaagagg
361 aggaggagga ggacatgagt cacttctcgt tgaggctgga gggaggccgg caggactcgg
421 aggacgagga ggagcgcctg attaatctct ctgagctgac cccatacatc ttgtgttcca
481 tttgcaaagg ttacttaata gatgcaacta ccatcacaga atgtcttcat accttttgta
541 aaagctgcat cgtaagacat ttttactaca gcaacagatg tccaaaatgc aatatagtag
601 tacatcagac acaacctctt tataacataa ggttggaccg acagttacaa gacatagtgt
661 acaaattagt gatcaatcta gaggaaagag aaaaaaagca aatgcatgat ttctataaag
721 aaagaggtct agaagtacct aaacctgctg ttccacagcc agtcccttca agcaaaggaa
781 gatctaaaaa agtcctagaa tcagtgtttc gtattccacc tgaacttgat atgtctttat
841 tactggagtt cattggtgct aatgaaggca cgggacattt taagccattg gaaaagaagt
901 ttgttcgagt ttcaggagaa gcaactattg gacatgtaga aaaattcctc agaagaaaaa
961 tgggtcttga tccagcttgt caggtagata taatctgtgg tgatcacctg ttggagcagt
1021 atcaaactct aagggaaatc cgacgtgcaa taggtgatgc agcaatgcag gatggtctgc
1081 ttgtccttca ttatggtctt gtggtttctc ctctgaagat aacttgaaga ttctaggcac
1141 attatgagga gggaaacaaa ggaggcttct gcaggactgc atctcaccaa agatttccat
1201 gaaatgtaat tgctaccact ttgctgttca agacataact tacctatttt tagcaccaag
1261 aattatagcg tttataagta caacttggaa cgatggaatg catctgttac tagagactgt
1321 atataaaaag cagccaaagc tcaggggaaa tttttcaaaa attgaatttt aaaatttctt
1381 atgattttaa ataccttgac attgattttg cttcccatct ttgaagtaat tggttagttt
1441 tctttgttca gccatttcaa gttggtggtt gggatatctg ctctctggga tggcatcagt
1501 tgggcagtca tctttttgga agagaagtgt gcttttgagt ggaagattca aagccagtct
1561 ttgttaaact gcagggtgta ctctcaaaga ccaaaactat tggccacttt tgtatgttgc
1621 cagcatattt tgaacttgta ccttttttta tactagcaac actacaaagg agaagttact
1681 catttcaaaa tggatgaatt gttattatgt gtgaagagac tctgagttta tgatctgtgc
1741 cataaaattt cagtgtaata agacttcttc aatacatctt ccaataaggg gtgcttcttt
1801 gtgacagtat ttttatttct gacattcatt ttatttgggt acatagtgtg gttgttgata
1861 ccttgcaata gtattgcttc tgaaagtaat aaaaaatttt aggagaattt gagaagttta
1921 gagaattact tattcattgt tttcttagta agtcagttta atgtttattt ttctcattat
1981 ttcatcactg caataaagaa taagggtgtt tgagctcacc tccatgcaaa gacttcagtt
2041 ttaaaacatt atttgcctaa aattagcatt gtgatgcttt ctgaaagaaa tattttataa
2101 atcctgttta acagcagaat ttctgaatgt gtagagacta ctacaaaatt ggaaaaagat
2161 tggcaattct ttgtaaagaa tttgtgaatt gtgtataaat ttattctaac atttaataaa
2221 aatgtatttt aacctaaaaa aaaaaaaaaa aaaa
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