LOCUS BC010160 1200 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 15, mRNA (cDNA clone MGC:19536 IMAGE:3677931),
complete cds.
ACCESSION BC010160
VERSION BC010160.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1200)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1200)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149319.
FEATURES Location/Qualifiers
source 1..1200
/db_xref="H-InvDB:HIT000034845"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19536 IMAGE:3677931"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1200
/gene="CLDN15"
/gene_synonym="MGC19536"
/db_xref="GeneID:24146"
/db_xref="HGNC:HGNC:2036"
CDS 170..556
/gene="CLDN15"
/gene_synonym="MGC19536"
/codon_start=1
/product="claudin 15"
/protein_id="AAH10160.1"
/db_xref="GeneID:24146"
/db_xref="HGNC:HGNC:2036"
/translation="MSMAVETFGFFMATVGLLMLGVTLPNSYWRVSTVHGNVITTNTI
FENLWFSCATDSLGVYNCWEFPSMLALSGSTDSPASLSGGTGLLVRLMSIKGPCEGRR
LASCRLSVRCKEAVCVQGIFRPAGHS"
BASE COUNT 240 a 376 c 335 g 249 t
ORIGIN
1 gaaagtggag acggacctga gcccgaggaa gaggcaggca gaggctgagg ctgattccac
61 cccagcctgc ctggacaacc ctccttagcc gcagcccctt ccagttccct aggggttctg
121 cccctccccc tctctggggc accagccccc cagggtcctg catcccacca tgtcgatggc
181 tgtggaaacc tttggcttct tcatggcaac tgtggggctg ctgatgctgg gggtgactct
241 gccaaacagc tactggcgag tgtccactgt gcacgggaac gtcatcacca ccaacaccat
301 cttcgagaac ctctggttta gctgtgccac cgactccctg ggcgtctaca actgctggga
361 gttcccgtcc atgctggccc tctctggctc cacagactcc ccagcctcac tgtcgggggg
421 cactggtctc cttgtccggc tgatgtctat aaagggcccc tgtgaaggga ggcgtcttgc
481 aagttgcagg ttgagcgtcc gctgtaagga ggcggtgtgt gtgcagggta tattcaggcc
541 tgccgggcac tcatgatcac cgccatcctc ctgggcttcc tcggcctctt gctaggcata
601 gcgggcctgc gctgcaccaa cattgggggc ctggagctct ccaggaaagc caagctggcg
661 gccaccgcag gggccctcca cattctggcc ggtaactggg ggaaggtgat ggggcggggg
721 tccccctcaa ccgcagactt caggctgctt tgtcctcatc taatctcctc tccaattccc
781 actcctcatg ctcacctccc ctaccctgct gcatggacac ctgctcaccc ctgcctcatc
841 tgtactcccc agatctcctg gctgcaaatc agcccatcgg cagtgtttct tgagctccca
901 gtaggggctg gccacggcca ggtgtgggag ggacttcgaa gataagagtg agcggctgcc
961 tccgggagct tacatcctag ctggggagca gagttagggt gcacgctatg gcgcacacac
1021 acagtgcacg tccacagtgc cataccacgg ggcatggtgg ctcatgcctg taatcccagc
1081 actttggtag gctgaggtgg gtggattact tgaggtcagg agttcaaaac cagcctggcc
1141 aacatggtga aaccctgtct ctactaaaaa tcccaaaaaa aaaaaaaaaa aaaaaaaaaa
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