LOCUS BC010132 2756 bp mRNA linear HUM 08-OCT-2003
DEFINITION Homo sapiens KH domain containing, RNA binding, signal transduction
associated 1, mRNA (cDNA clone MGC:19537 IMAGE:3956853), complete
cds.
ACCESSION BC010132
VERSION BC010132.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2756)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2756)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010132.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: k Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5730026.
FEATURES Location/Qualifiers
source 1..2756
/db_xref="H-InvDB:HIT000050533"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19537 IMAGE:3956853"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2756
/gene="KHDRBS1"
/gene_synonym="p62"
/gene_synonym="Sam68"
/db_xref="GeneID:10657"
/db_xref="MIM:602489"
CDS 71..1216
/gene="KHDRBS1"
/gene_synonym="p62"
/gene_synonym="Sam68"
/codon_start=1
/product="KHDRBS1 protein"
/protein_id="AAH10132.1"
/db_xref="GeneID:10657"
/db_xref="MIM:602489"
/translation="MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRS
RGGGGGSRGGARASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENK
YLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERV
LIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP
KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNG
VPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVP
PPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYVRNLNNVPFPST"
misc_feature 533..895
/gene="KHDRBS1"
/gene_synonym="p62"
/gene_synonym="Sam68"
/note="MSL5; Region: COG5176, MSL5, Splicing factor
(branch point binding protein) [RNA processing and
modification]"
/db_xref="CDD:COG5176"
BASE COUNT 787 a 608 c 662 g 699 t
ORIGIN
1 gccaaccgcc gctcgggcct ccgtcgctgc cgcgtcgctt tctcgctcct tggatcgcac
61 atcctcccag atgcagcgcc gggacgaccc cgccgcgcgc atgagccggt cttcgggccg
121 tagcggctcc atggacccct ccggtgccca cccctcggtg cgtcagacgc cgtctcggca
181 gccgccgctg cctcaccggt cccggggagg cggaggggga tcccgcgggg gcgcccgggc
241 ctcgcccgcc acgcagccgc caccgctgct gccgccctcg gccacgggtc ccgacgcgac
301 agtgggcggg ccagcgccga ccccgctgct gcccccctcg gccacagcct cggtcaagat
361 ggagccagag aacaagtacc tgcccgaact catggccgag aaggactcgc tcgacccgtc
421 cttcactcac gccatgcagc tgctgacggc agaaattgag aagattcaga aaggagactc
481 aaaaaaggat gatgaggaga attacttgga tttattttct cataagaaca tgaaactgaa
541 agagcgagtg ctgatacctg tcaagcagta tcccaagttc aattttgtgg ggaagattct
601 tggaccacaa gggaatacaa tcaaaagact gcaggaagag actggtgcaa agatctctgt
661 attgggaaag ggctcaatga gagacaaagc caaggaggaa gagctgcgca aaggtggaga
721 ccccaaatat gcccacttga atatggatct gcatgtcttc attgaagtct ttggaccccc
781 atgtgaggct tatgctctta tggcccatgc catggaggaa gtcaagaaat ttctagtacc
841 ggatatgatg gatgatatct gtcaggagca atttctagag ctgtcctact tgaatggagt
901 acctgaaccc tctcgtggac gtggggtgcc agtgagaggc cggggagctg cacctcctcc
961 accacctgtt cccaggggcc gtggtgttgg accacctcgg ggggctttgg tacgtggtac
1021 accagtaagg ggagccatca ccagaggtgc cactgtgact cgaggcgtgc cacccccacc
1081 tactgtgagg ggtgctccag caccaagagc acggacagcg ggcatccaga ggataccttt
1141 gcctccacct cctgcaccag aaacatatga agaatatgta agaaatttga acaatgtgcc
1201 atttcccagt acctagaagg ctgctaaagg aagttgaatg acagggcctc ggtcctttat
1261 ggatatgatg atacatacgc agaacaaagt tacgaaggct acgaaggcta ttacagccag
1321 agtcaagggg actcagaata ttatgactat ggacatgggg aggttcaaga ttcttatgaa
1381 gcttatggcc aggacgactg gaatgggacc aggccgtcgc tgaaggcccc tcctgctagg
1441 ccagtgaagg gagcatacag agagcaccca tatggacgtt attaaaaaca aacatgaggg
1501 gaaaatatca gttatgagca aagttgttac tgatttcttg tatctcccag gattcctgtt
1561 gctttaccca caacagacaa gtaattgtct aagtgttttt cttcgtggtc cccttcttct
1621 ccccacctta ttccattctt aactctgcat tctggcttct gtatgtagta ttttaaaatg
1681 agttaaaata gatttaggaa tattgaatta attttttaag tgtgtagatg cttttttctt
1741 tgttgtttaa atataaacag aagtgtacct tttataataa aaaaaagaag ttgagtaaaa
1801 aaaaaaaaca cacaaacctg ttagtttcaa aaatgacatt gcttgcttaa aggttctgaa
1861 gtaaaggctt gttaagtttc tcttagtttt gatttgaggc atcccgtaaa gttgtagttg
1921 cagaatccca aactaggcta catttcaaaa ttcagggctg tttaagattt aaaatcacaa
1981 acattaacgg cagtaggcac caccatgtaa aagtgagctc agacgtctct aaaaaatgtt
2041 tcctttataa aagcacatgg cggttgaatc ttaaggttaa attttaatat gaaagatcct
2101 catgaattaa atagttgatg caatttttaa cgttaattga tataaaaaaa aaaacaacaa
2161 aattaggctt gtaaaactga ctttttcatt acgtgggttt tgaaatctag ccccagacat
2221 actgtgttga gagatactta gagggaggga gtaggttttg aagaggttga tggtggtggg
2281 gagggaaggc ctcctgaatt gagtttgatg cagagctttt tagccatgaa gaatctttca
2341 gtcatagtac taataattaa attttcagta tttaaaaaga caaagtattt tgtccatttg
2401 agattctgca ctccatgaaa agttcacttg gacgctgggg ccaaaagctg ttgattttct
2461 taagttgacg gttgtcaata tatcggactg ttcccaagtt agtcaagtat gtctcaacac
2521 tagcatgata taaaaaggga cactgcagct gaatgaaaaa ggaatcaaaa tccactttgt
2581 acataagtta aagtcctaat tggatttgta ccgtcctccc attttgttct cggaagatta
2641 aatgctacat gtgtaagtct gcctaaatag gtagcttaaa cttatgtcaa aatgtctgca
2701 gcagtttgtc aataaagttt agtccttttt taatcaaaaa aaaaaaaaaa aaaaaa
//