LOCUS BC010106 2900 bp mRNA linear HUM 19-NOV-2003
DEFINITION Homo sapiens citrate synthase, mRNA (cDNA clone MGC:19593
IMAGE:3542491), complete cds.
ACCESSION BC010106
VERSION BC010106.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2900)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758075.
FEATURES Location/Qualifiers
source 1..2900
/db_xref="H-InvDB:HIT000034804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19593 IMAGE:3542491"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2900
/gene="CS"
/db_xref="GeneID:1431"
/db_xref="MIM:118950"
CDS 119..1519
/gene="CS"
/codon_start=1
/product="CS protein"
/protein_id="AAH10106.1"
/db_xref="GeneID:1431"
/db_xref="MIM:118950"
/translation="MALLTAAARLLGTKNASCLVLAARHASASSTNLKDILADLIPKE
QARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQ
KLLPKAKGGEEPLPEGLFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPT
NLHPMSQLSAAVTALNSESNFARAYAQGISRTKYWELIYEDSMDLIAKLPCVAAKIYR
NLYREGSGIGAIDSNLDWSHNFTNMLGYTDHQFTELTRLYLTIHSDHEGGNVSAHTSH
LVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTQLQKEVGKDVSDEKLRDYIWN
TLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQG
KAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPK
SMSTEGLMKFVDSKSG"
misc_feature 329..1465
/gene="CS"
/note="citrate_synt; Region: Citrate synthase"
/db_xref="CDD:pfam00285"
BASE COUNT 735 a 733 c 657 g 775 t
ORIGIN
1 ctcctttcaa ccttgtcaac ccgtcggcgc ggcctctggt gcagcggcgg cggctcctgt
61 tcctgccgca gctctctccc tttcttacct ccccaccaga tcccggagat cgcccgccat
121 ggctttactt actgcggccg cccggctctt gggaaccaag aatgcatctt gtcttgttct
181 tgcagcccgg catgccagtg cttcctccac gaatttgaaa gacatattgg ctgacctgat
241 acctaaggag caggccagaa ttaagacttt caggcagcaa catggcaaga cggtggtggg
301 ccaaatcact gtggacatga tgtatggtgg catgagaggc atgaagggat tggtctatga
361 aacatcagtt cttgatcctg atgagggcat ccgtttccga ggctttagta tccctgaatg
421 ccagaaactg ctacccaagg ctaagggtgg ggaagaaccc ctgcctgagg gcttattttg
481 gctgctggta actggacata tcccaacaga ggaacaggta tcttggctct caaaagagtg
541 ggcaaagagg gcagctctgc cttcccatgt ggtcaccatg ctggacaact ttcccaccaa
601 tctacacccc atgtctcagc tcagtgcagc tgttacagcc ctcaacagtg aaagtaactt
661 tgcccgagca tatgcacagg gtatcagccg aaccaagtac tgggagttga tttatgaaga
721 ctctatggat ctaatcgcaa agctaccttg tgttgcagca aagatctacc gaaatctcta
781 cagagaaggc agcggtattg gggccattga ctctaacctg gactggtctc acaatttcac
841 caacatgtta ggctatactg atcatcagtt cactgagctc acgcgcctgt acctcaccat
901 ccacagtgac catgagggtg gcaatgtaag tgcccatacc agccatttgg tgggcagtgc
961 cctttccgac ccttacctgt cctttgcagc agccatgaac gggctggcag ggcctctcca
1021 tggactggca aatcaggaag tgcttgtctg gctaacacag ctgcagaagg aagttggcaa
1081 agatgtgtca gatgagaagt tacgagacta catctggaac acactcaact caggacgggt
1141 tgttccaggc tatggccatg cagtactaag gaagactgat ccgcgatata cctgtcagcg
1201 agagtttgct ctgaaacacc tgcctaatga ccccatgttt aagttggttg ctcagctgta
1261 caagattgtg cccaatgtcc tcttagagca gggtaaagcc aagaatcctt ggcccaatgt
1321 agatgctcac agtggggtgc tgctccagta ttatggcatg acggagatga attactacac
1381 ggtcctgttt ggggtgtcac gagcattggg tgtactggca cagctcatct ggagccgagc
1441 cttaggcttc cctctagaaa ggcccaagtc catgagcaca gagggtctga tgaagtttgt
1501 ggactctaag tcagggtaaa actggagact gggtgaaagt gactaccaga aagtgaggaa
1561 gcctaaataa aaagtatact tttgtttcag ggggccttta aagacttaag attaaattat
1621 atctgaggca ctgataatat gtttgaggtt aaaatataaa ttaagacttt aaaagatgaa
1681 aaatggtccc ttcttcccta atcagctccc ttcccctgcc tggtatgagt tgcccatcat
1741 acgcatggtc ctggaggatg accaggacta atgcatgtgg tatgagtagg tttggccccc
1801 tcactatctc tagagtgaga atctggctcc tgtttccatg ggtcaaagcc ggttgcagag
1861 aatctgtagt cactttggag ctttagcttc tctgccaagc cctcaataag ccagcaaacc
1921 aggactctgc cccttctgtt tccataggaa tcatgttgga tagtcagccc tctcccatgc
1981 acacaaacac ctcctagcaa gacctgttgg ttagctggac atgctttggc aattttttta
2041 tactaccaag tgaccataaa ggcatggcat ttgttgtgac tggcacccaa tgtttgattt
2101 tttttttaaa actatccaat taaaattaag gtctgggagt gttctgtttc ccattacttt
2161 aatactcacc tcctcccaga ctttctacac ctgttgcacc tcaggcagag gatgttctgg
2221 acctccccct cttggtccct actagagacc tctcaacaga tctgtgggcc cagtcattgg
2281 gttttatcag tgcttaatgt gaactaagtt ttttacttcc acagaataca agccactacc
2341 ttctgacctc cccacccccc accaaccccc atcttttaat atgctgtggg gcatagaact
2401 ccggaatgac cagcatgata ttttcagagt cttgtccccg gggtattagc acctcttttt
2461 gaacagggaa ttgattcaag attggacatg gtctcctctg attatcaggt actggggctg
2521 agggcattaa aaatagtaag cctccctcct cgtcccctgc ctcaagaaat tgcctcctta
2581 tttatcaaca tctttttcct ccctttccct gagagctcac agtacaatgt ttcagaagcc
2641 ccatttgcac aggttttcag caactcagaa tgctctactt ctttttcttt gagaaaggat
2701 taagatacac tcctgctgtg cccccatctt tcctccaaac tcctgcctgt gtttgtgtgg
2761 atacccagtc ccagaaccac actgttgagt tggacacact gtaaacccct gggtaactgt
2821 caagtcatga tggagacttc aggttgttct gtataaaatg caaaataaat gtttttatta
2881 acaaaaaaaa aaaaaaaaaa
//