LOCUS BC010102 1122 bp mRNA linear HUM 25-JAN-2007
DEFINITION Homo sapiens apolipoprotein O, mRNA (cDNA clone MGC:19603
IMAGE:3535847), complete cds.
ACCESSION BC010102
VERSION BC010102.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1122)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1122)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010102.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147363.
FEATURES Location/Qualifiers
source 1..1122
/db_xref="H-InvDB:HIT000034801"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19603 IMAGE:3535847"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1122
/gene="APOO"
/gene_synonym="My025"
/db_xref="GeneID:79135"
/db_xref="HGNC:HGNC:28727"
CDS 219..815
/gene="APOO"
/gene_synonym="My025"
/codon_start=1
/product="apolipoprotein O"
/protein_id="AAH10102.1"
/db_xref="GeneID:79135"
/db_xref="HGNC:HGNC:28727"
/translation="MFKVIQRSVGPASLSLLTFKVYAAPKKDSPPKNSVKVDELSLYS
VPEGQSKYVEEARSQLEESISQLRHYCEPYTTWCQETYSQTKPKMQSLVQWGLDSYDY
LQNAPPGFFPRLGVIGFAGLIGLLLARGSKIKKLVYPPGFMGLAASLYYPQQAIVFAQ
VSGERLYDWGLRGYIVIEDLWKENFQKPGNVKNSPGTK"
BASE COUNT 328 a 264 c 254 g 276 t
ORIGIN
1 ccagggcgcg acgcgctgcg gctcagcgac gcggcttcta gaaccgggtg attgaactaa
61 accttcgccg caccgagttt gcagtacggc cgtcacccgc accgctgcct gcttgcggtt
121 ggagaaatca aggccctacc gggcctccgt agtcacctct ctatagtggg cgtggccgag
181 gccggggtga ccctgccgga gcctccgctg ccagcgacat gttcaaggta attcagaggt
241 ccgtggggcc agccagcctg agcttgctca ccttcaaagt ctatgcagca ccaaaaaagg
301 actcacctcc caaaaattcc gtgaaggttg atgagctttc actctactca gttcctgagg
361 gtcaatcgaa gtatgtggag gaggcaagga gccagcttga agaaagcatc tcacagctcc
421 gacactattg cgagccatac acaacctggt gtcaggaaac gtactcccaa actaagccca
481 agatgcaaag tttggttcaa tgggggttag acagctatga ctatctccaa aatgcacctc
541 ctggattttt tccgagactt ggtgttattg gttttgctgg ccttattgga ctccttttgg
601 ctagaggttc aaaaataaag aagctagtgt atccgcctgg tttcatggga ttagctgcct
661 ccctctatta tccacaacaa gccatcgtgt ttgcccaggt cagtggggag agattatatg
721 actggggttt acgaggatat atagtcatag aagatttgtg gaaggagaac tttcaaaagc
781 caggaaatgt gaagaattca cctggaacta agtagaaaac tccatgctct gccatcttaa
841 tcagttatag gtaaacattg gaaactccat agaataaatc agtatttcta cagaaaaatg
901 gcatagaagt cagtattgaa tgtattaaat tggctttctt cttcaggaaa aactagacca
961 gacctctgtt atcttctgtg aaatcatcct acaagcaaac taacctggaa tcccttcacc
1021 tagagataat gtacaagcct tagaactcct cattctcatg ttgctattta tgtacctaat
1081 taaaacccaa gttaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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