LOCUS BC009982 3210 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens myosin phosphatase Rho interacting protein, mRNA (cDNA
clone IMAGE:4121355), partial cds.
ACCESSION BC009982
VERSION BC009982.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC009982.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3210
/db_xref="H-InvDB:HIT000087421"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4121355"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3210
/gene="MPRIP"
/gene_synonym="M-RIP"
/gene_synonym="p116Rip"
/gene_synonym="RHOIP3"
/db_xref="GeneID:23164"
/db_xref="HGNC:HGNC:30321"
CDS <1..2529
/gene="MPRIP"
/gene_synonym="M-RIP"
/gene_synonym="p116Rip"
/gene_synonym="RHOIP3"
/codon_start=1
/product="MPRIP protein"
/protein_id="AAH09982.2"
/db_xref="GeneID:23164"
/db_xref="HGNC:HGNC:30321"
/translation="KKKRKVEPPTPQEPGPAKVAVTSSSSSSSSSIPSAEKVPTTKST
LWQEEMRTKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESKEEESAMSSDRMDCGRK
VRVESGYFSLEKTKQDLKAEEQQLPPPLSPPSPSTPNHRRSQVIEKFEALDIEKAEHM
ETNAVGPSPSSDTRQGRSEKRAFPRKRPDLLNFKKGWLTKQYEDGQWKKHWFVLADQS
LRYYRDSVAEEAADLDGEIDLSACYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRR
NWIQTIMKHVHPTTAPDVTSSLPEEKNKSSCSFETCPRPTEKQEAELGEPDPEQKRSR
ARERRREGRSKTFDWAEFRPIQQALAQERVGGVGPADTHEPLRPEAEPGELERERARR
REERRKRFGMLDATDGPGTEDAALRMEVDRSPGLPMSDLKTHNVHVEIEQRWHQVETT
PLREEKQVPIAPVHLSSEDGGDRLSTHELTSLLEKELEQSQKEASDLLEQNRLLQDQL
RVALGREQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLA
EETAATISAIEAMKNAHREEMERELEKSQRSQISSVNSDVEALRRQYLEELQSVQREL
EVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRT
LLTGDGGGEATGSPLAQGKDAYELEVLLRVKESEIQYLKQEISSLKDELQTALRDKKY
ASDKYKDIYTELSIAKAKADCDISRLKEQLKAATEALGEKSPDSATVSGYDIMKSKSN
PDFLKKDRSCVTRQLRNIRSKSLKEGLTVQERLKLFESRDLKKD"
BASE COUNT 812 a 871 c 973 g 554 t
ORIGIN
1 aagaagaaac ggaaagtgga gccccccaca ccacaggagc ctgggcctgc caaggtggct
61 gttaccagca gcagcagcag cagcagcagc agcatcccca gtgctgagaa agtccccacc
121 accaagtcca cactctggca ggaagaaatg aggaccaagg accagccaga tggcagcagc
181 ctgagtccag ctcagagtcc cagccagagc cagcctcctg ctgccagctc cctgcgggaa
241 cctgggctag agagcaaaga agaggagagc gccatgagta gcgaccgcat ggactgtggc
301 cgcaaagtcc gggtggagag cggctacttc tctctggaga agaccaaaca ggacttgaag
361 gctgaagaac agcagctgcc cccgccgctc tcccctccca gccccagcac ccccaaccac
421 aggaggtccc aggtgattga aaagtttgag gccttggaca ttgagaaggc agagcacatg
481 gagaccaatg cagtggggcc ctcaccatcc agcgacacac gccagggccg cagcgagaag
541 agggcgttcc ctaggaagcg gcccgacctg ctgaatttca agaaaggctg gctgactaag
601 cagtatgagg acggccagtg gaagaaacac tggtttgtcc tcgccgatca aagcctgaga
661 tactacaggg attcagtggc tgaggaggca gccgacttgg atggagaaat tgacttgtcc
721 gcatgttacg atgtcacaga gtatccagtt cagagaaact atggcttcca gatacataca
781 aaggagggcg agtttaccct gtcggccatg acatctggga ttcggcggaa ctggatccag
841 accatcatga agcacgtgca cccgaccact gccccggatg tgaccagctc gttgccagag
901 gaaaaaaaca agagcagctg ctcttttgag acctgcccga ggcctactga gaagcaagag
961 gcagagctgg gggagccgga ccctgagcag aagaggagcc gcgcacggga gcggaggcga
1021 gagggccgct ccaagacctt tgactgggct gagttccgtc ccatccagca ggccctggct
1081 caggagcggg tgggcggcgt ggggcctgct gacacccacg agcccctgcg ccctgaggcg
1141 gagcctgggg agctggagcg ggagcgtgca cggaggcggg aggagcgccg caagcgcttc
1201 gggatgctcg acgccacaga cgggccaggc actgaggatg cagccctgcg catggaggtg
1261 gaccggagcc cagggctgcc tatgagcgac ctcaaaacgc ataacgtcca cgtggagatt
1321 gagcagcggt ggcatcaggt ggagaccaca cctctccggg aagagaagca ggtgcccatc
1381 gcccccgtcc acctgtcttc tgaagatggg ggtgaccggc tctccacaca cgagctgacc
1441 tctctgctcg agaaggagct ggagcagagc cagaaggagg cctcagacct tctggagcag
1501 aaccggctcc tgcaggacca gctgagggtg gccctgggcc gggagcagag cgcccgtgag
1561 ggctacgtgc tgcaggccac gtgcgagcga gggtttgcag caatggaaga aacgcaccag
1621 aagaagattg aagatctcca gaggcagcac cagcgggagc tagagaaact tcgagaagag
1681 aaagaccgcc tcctagccga ggagacagcg gccaccatct cagccatcga agccatgaag
1741 aacgcccacc gggaggaaat ggagcgggag ctggagaaga gccagcggtc ccagatcagc
1801 agcgtcaact cggatgttga ggccctgcgg cgccagtacc tggaggagct gcagtcggtg
1861 cagcgggaac tggaggtcct ctcggagcag tactcgcaga agtgcctgga gaatgcccat
1921 ctggcccagg cgctggaggc cgagcggcag gccctgcggc agtgccagcg tgagaaccag
1981 gagctcaatg cccacaacca ggagctgaac aaccgcctgg ctgcagagat cacacggttg
2041 cggacgctgc tgactgggga cggcggtggg gaggccactg ggtcacccct tgcacagggc
2101 aaggatgcct atgaactaga ggtcttattg cgggtaaagg aatcggaaat acagtacctg
2161 aaacaggaga ttagctccct caaggatgag ctgcagacgg cactgcggga caagaagtat
2221 gcaagtgaca agtacaaaga catctacaca gagctcagca tcgcgaaggc taaggctgac
2281 tgtgacatca gcaggttgaa ggagcagctc aaggctgcaa cggaagcact gggggagaag
2341 tcccctgaca gtgccacggt gtccggatat gatataatga aatctaaaag caaccctgac
2401 ttcttgaaga aagacagatc ctgtgtcacc cggcaactca gaaacatcag gtccaagagt
2461 ctgaaggaag gcctgacggt gcaagaacgg ttgaagctct ttgaatccag ggacttgaag
2521 aaagactagg tgtgtcccat ccaagttgag cacgcgcctt ccccagcttg cagcagcaca
2581 ccccaagcgc tgcttttcac ctgtaccttt gttttattat tattattatt attgctgttg
2641 ttgtcatcgt taactgtggg catggaatgc gtgaggctgg cttctgggtt gtccacacca
2701 ctctctgctg tgttgacttc ctgttgtctt catcaaagct tttttctgtg gtattctaaa
2761 attaggccag cagtgggggc tgggagggca tctgtgttag tcctttcctg gctgtgaccc
2821 gccacactca ctgtcagtat taaggcccag cagcctgttg ataagctacc ctgtctcacc
2881 atgtgctggt gtggaaacgg ggcccagcca gcacgcctca aggtagatgg aatccccact
2941 ggtcagagaa aaagctatgc ggacactcca gcttggcctg ggtcacagca ctgactcctc
3001 acccgctagt ctggctgtta agaggagaaa gtgcactgcc ttccagccca ggaggaggac
3061 agcattttgt atttgttcca ctgatgcagc ttagaaccac acccctgaga gtcgtggcaa
3121 acctttcaca acctggaaaa tgttgaaagc aaccattcct atttttgttt gttttttatt
3181 aaatcttgca caaaaaaaaa aaaaaaaaaa
//