LOCUS BC009906 2676 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 35, member A4, mRNA (cDNA clone
MGC:2541 IMAGE:2961449), complete cds.
ACCESSION BC009906
VERSION BC009906.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2676)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2676)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC009906.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725666.
FEATURES Location/Qualifiers
source 1..2676
/db_xref="H-InvDB:HIT000034659"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2541 IMAGE:2961449"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2676
/gene="SLC35A4"
/gene_synonym="MGC2541"
/db_xref="GeneID:113829"
/db_xref="HGNC:HGNC:20753"
CDS 729..1703
/gene="SLC35A4"
/gene_synonym="MGC2541"
/codon_start=1
/product="solute carrier family 35, member A4"
/protein_id="AAH09906.1"
/db_xref="GeneID:113829"
/db_xref="HGNC:HGNC:20753"
/translation="MSVEDGGMPGLGRPRQARWTLMLLLSTAMYGAHAPLLALCHVDG
RVPFRPSSAVLLTELTKLLLCAFSLLVGWQAWPQGPPPWRQAAPFALSALLYGANNNL
VIYLQRYMDPSTYQVLSNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGG
LQVPGNTLPSPPPAAAASPMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQRLPLA
LQNLFLYTFGVLLNLGLHAGGGSGPGLLEGFSGWAALVVLSQALNGLLMSAVMKHGSS
ITRLFVVSCSLVVNAVLSAVLLRLQLTAAFFLATLLIGLAMRLYYGSR"
BASE COUNT 533 a 836 c 673 g 634 t
ORIGIN
1 gcggggaaga tggcggatga caaggattct ctgcctaagc ttaaggacct ggcatttctc
61 aagaaccagc tggaaagcct gcagcggcgt gtagaagacg aagtcaacag tggagtgggc
121 caggatggct cgctgttgtc ctccccgttc ctcaagggat tcctggctgg ctatgtggtg
181 gccaaactga gggcatcagc agtattgggc tttgctgtgg gcacctgcac tggcatctat
241 gcggctcagg catatgctgt gcccaacgtg gagaagacat taagggacta tttgcagttg
301 ctacgcaagg ggcccgacta gctctaggtg ccatggaaga ggcaggatga gcagctcagc
361 cttcaggtgg agacacttta tctggattcc ccagctgtca tccatttgct atctccaact
421 ttcctgccac cttcatcctt gcctcccttc ctgcagattg tggacagtag ttcctcagcc
481 tgcaccctgg attccttctt ccccttccta gctccatggg actcgcccca agactgtggc
541 ttcaaggacc accagcccct tactcttcaa gccctgactg tggagttggt agatgcctct
601 gatcctcagt attctctctg gcaatgttcc acggcttctc cttcctggga gctggctcca
661 taacttgatt ttccccaaac gtgttgcaat ccctgctgcc ccttagccac ccagggtctt
721 gtgtgggtat gagtgtagag gatgggggta tgccaggcct gggccgtccc aggcaggccc
781 gctggaccct gatgctactc ctatccactg ccatgtacgg tgcccatgcc ccattgctgg
841 cactgtgcca tgtggacggc cgagtgccct tccggccctc ctcagccgtg ctgctgactg
901 agctgaccaa gctactgtta tgcgccttct cccttctggt aggctggcaa gcatggcccc
961 aggggccccc accctggcgc caggctgctc ccttcgcact atcagccctg ctctatggcg
1021 ctaacaacaa cctggtgatc tatcttcagc gttacatgga ccccagcacc taccaggtgc
1081 tgagtaatct caagattgga agcacagctg tgctctactg cctctgcctc cggcaccgcc
1141 tctctgtgcg tcaggggtta gcgctgctgc tgctgatggc tgcgggagcc tgctatgcag
1201 cagggggcct tcaagttccc gggaacaccc ttcccagtcc ccctccagca gctgctgcca
1261 gccccatgcc cctgcatatc actccgctag gcctgctgct cctcattctg tactgcctca
1321 tctcaggctt gtcgtcagtg tacacagagc tgctcatgaa gcgacagcgg ctgcccctgg
1381 cacttcagaa cctcttcctc tacacttttg gtgtgcttct gaatctaggt ctgcatgctg
1441 gcggcggctc tggcccaggc ctcctggaag gtttctcagg atgggcagca ctcgtggtgc
1501 tgagccaggc actaaatgga ctgctcatgt ctgctgtcat gaagcatggc agcagcatca
1561 cacgcctctt tgtggtgtcc tgctcgctgg tggtcaacgc cgtgctctca gcagtcctgc
1621 tacggctgca gctcacagcc gccttcttcc tggccacatt gctcattggc ctggccatgc
1681 gcctgtacta tggcagccgc tagtccctga caacttccac cctgattccg gaccctgtag
1741 attgggcgcc accaccagat ccccctccca ggccttcctc cctctcccat cagcagccct
1801 gtaacaagtg ccttgtgaga aaagctggag aagtgagggc agccaggtta ttctctggag
1861 gttggtggat gaaggggtac ccctaggaga tgtgaagtgt gggtttggtt aaggaaatgc
1921 ttaccatccc ccacccccaa ccaagttctt ccagactaaa gaattaaggt aacatcaata
1981 cctaggcctg agaaataacc ccatccttgt tgggcagctc cctgctttgt cctgcatgaa
2041 cagagttgat gaaagtgggg tgtgggcaac aagtggcttt ccttgcctac tttagtcacc
2101 cagcagagcc actggagctg gctagtccag cccagccatg gtgcatgact cttccataag
2161 ggatcctcac ccttccactt tcatgcaaga aggcccagtt gccacagatt atacaaccat
2221 tacccaaacc actctgacag tctcctccag ttccagcaat gcctagagac atgctccctg
2281 ccctctccac agtgctgctc cccacaccta gcctttgttc tggaaacccc agagagggct
2341 gggcttgact catctcaggg aatgtagccc ctgggccctg gcttaagccg acactcctga
2401 cctctctgtt caccctgagg gctgtcttga agcccgctac ccactctgag gctcctagga
2461 ggtaccatgc ttcccactct ggggcctgcc cctgcctagc agtctcccag ctcccaacag
2521 cctggggaag ctctgcacag agtgacctga gaccaggtac aggaaacctg tagctcaatc
2581 agtgtctctt taactgcata agcaataaga tcttaataaa gtcttctagg ctgtagggtg
2641 gttcctacaa ccacagcaaa aaaaaaaaaa aaaaaa
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