LOCUS BC009808 3114 bp mRNA linear HUM 22-FEB-2005
DEFINITION Homo sapiens neighbor of BRCA1 gene 1, mRNA (cDNA clone MGC:1377
IMAGE:2989212), complete cds.
ACCESSION BC009808
VERSION BC009808.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3114)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3114)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009808.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14110374.
FEATURES Location/Qualifiers
source 1..3114
/db_xref="H-InvDB:HIT000034592"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1377 IMAGE:2989212"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3114
/gene="NBR1"
/gene_synonym="KIAA0049"
/gene_synonym="M17S2"
/gene_synonym="MIG19"
/db_xref="GeneID:4077"
/db_xref="MIM:166945"
CDS 70..2883
/gene="NBR1"
/gene_synonym="KIAA0049"
/gene_synonym="M17S2"
/gene_synonym="MIG19"
/codon_start=1
/product="NBR1 protein"
/protein_id="AAH09808.1"
/db_xref="GeneID:4077"
/db_xref="MIM:166945"
/translation="MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTI
QIKYLDEENEEVSINSQGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRL
AARAGKKPLAHYSSLVRVLGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLET
FREQVVNETVEKLEQKLHEKLVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACN
NCQRRIVGVRYQCSLCPSYNICEDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYS
TPRLPAALEQVRLQKQVDKNFLKAEKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNS
IHGLQSPKSPLGRPESLLQSNTLMLPLQPCTSVMPMLSAAFVDENLPDGTHLQPGTKF
IKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGVVSVEFIAPA
LEGTYTSHWRLSHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSKTDDLTCQQE
ETFLLAKEERQLGEVTEQTEGTAACIPQKAKNVASERELYIPSVDLLTAQDLLSFELL
DINIVQELERVPHNTPVDVTPCMSPLPHDSPLIEKPGLGQIEEENEGAGFKALPDSMV
SVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLDAAPDHNPPCRQKSLQMTFALPE
GPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSEDYIIILPECF
DTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAGERLPGGENQPQEHSISDI
LTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPVTIPEVSSVPDQIRGEP
RGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKALFAGPPVTAQGLWGL
LSFLHLAKKCFFLKAPSEAFSWF"
BASE COUNT 883 a 742 c 775 g 714 t
ORIGIN
1 ccggtagcgg acggtccttg cattggcctc cggcaggcgc cccccggggg cgggaagctg
61 cctcacagca tggaaccaca ggttactcta aatgtgactt ttaaaaatga aattcaaagc
121 tttctggttt ctgatccaga aaatacaact tgggctgata tcgaagctat ggtaaaagtt
181 tcatttgatc tgaatactat tcaaataaaa tacctggatg aggaaaatga agaggtatcc
241 atcaacagtc aaggagaata tgaagaagcg cttaagatgg cagttaaaca gggaaaccaa
301 ctgcagatgc aagtccacga agggcaccat gtcgttgatg aagccccacc cccagttgta
361 ggagcaaaac gactagctgc cagggcaggg aagaagccac ttgcacatta ctcttcactg
421 gtgagagtct tgggatcaga catgaagacc ccagaggatc ctgcagtgca gtcgtttcca
481 cttgttccat gtgacacaga ccagcctcaa gacaagcccc cagactggtt cacaagctac
541 ctggagacgt tcagagaaca agtggttaac gaaacggttg agaagcttga acagaaatta
601 catgaaaagc ttgtcctcca gaacccatcc ttgggttctt gtccctcaga agtctcaatg
661 cctacttcag aagaaacatt gtttttgcca gaaaaccagt tcagctggca tattgcttgc
721 aacaactgcc aaagaaggat tgttggtgtc cgctaccagt gtagcctatg cccatcctac
781 aatatctgtg aagattgtga agcagggcca tatggccatg acactaacca cgtcctgctg
841 aagttgcgga gacctgttgt gggctcctct gaaccgttct gtcactcaaa gtactctact
901 cctcgtcttc ctgctgctct ggaacaagtc aggctccaga aacaggttga taagaacttt
961 cttaaagcag aaaagcaaag gttgcgagct gagaagaaac aacgtaaagc agaggtcaag
1021 gaacttaaaa agcagcttaa actccatagg aaaattcacc tgtggaattc aatccatgga
1081 ctccagagcc ccaagtctcc tttaggccga cctgagagct tgctccagtc taataccctg
1141 atgctccctt tgcagccctg tacctccgtt atgccaatgc tcagtgcagc atttgtggat
1201 gagaatttgc ctgatgggac tcaccttcag ccaggaacca agtttatcaa acactggagg
1261 atgaaaaata caggaaatgt aaagtggagt gcagacacaa agctcaagtt catgtgggga
1321 aacctgactt tggcttccac agaaaagaag gatgttttgg ttccctgcct caaggccggc
1381 catgtgggag ttgtatctgt ggagttcatt gccccagcct tggagggaac gtatacttcc
1441 cattggcgtc tttctcacaa aggccagcaa tttgggcctc gggtctggtg cagtatcata
1501 gtagatcctt tcccctccga agagagccct gataacattg aaaagggcat gatcagctca
1561 agcaaaactg atgatctcac ctgccagcaa gaggaaactt ttcttctggc taaagaagaa
1621 agacagcttg gtgaagtgac tgagcagaca gaagggacag cagcctgcat cccacagaag
1681 gcaaaaaatg ttgccagtga gagggagctc tacatcccat ctgtggatct tctgactgcc
1741 caggacctgc tgtcctttga gctgttggat ataaacattg ttcaagagtt ggagagagtg
1801 ccccacaaca cccctgtgga tgtgactccc tgcatgtctc ctctgccaca tgacagtcct
1861 ttaatagaga agccaggctt ggggcagata gaggaagaga atgaaggggc aggatttaaa
1921 gcacttcctg attctatggt gtcagtaaag aggaaggctg agaacattgc ttctgtggag
1981 gaagcagaag aagacctgag tgggacccag tttgtgtgtg agacagtaat ccgatccctt
2041 accttggatg ctgccccaga ccacaaccct ccttgcagac agaagtcctt gcagatgaca
2101 tttgccttgc ctgaaggacc acttggaaat gagaaggagg agattatcca tatcgctgag
2161 gaagaagctg tcatggagga ggaggaggat gaggaggatg aggaggagga ggatgagctc
2221 aaagatgaag ttcaaagtca gtcctctgct tcctcagagg attacatcat catcctgcct
2281 gagtgctttg ataccagccg ccccctgggg gattctatgt acagctctgc gctctcacag
2341 ccaggcctgg agcgaggtgc tgaaggcaag cctggggttg aggctgggca ggaaccagct
2401 gaggctgggg aaagactccc tggaggggag aaccagccac aggagcacag cataagtgac
2461 atcctcacga cctcacagac tctggaaaca gtgcccctaa tcccagaggt agtggagctt
2521 ccaccgtcac tgcccaggag ctctccttgt gtacatcatc atggttcccc aggagtggat
2581 ttaccagtta ccataccaga agtttcttca gtccctgatc agatcagagg agagcccaga
2641 ggctcatcag gacttgtaaa cagcagacag aagagctatg accactcaag gcaccatcat
2701 gggagcagca ttgctggagg actggtgaag ggggctttgt ctgttgctgc ctctgcatac
2761 aaggccctgt ttgctgggcc accagtcact gcacagggtc tctggggctt gctgtcattc
2821 cttcatctgg ccaaaaaatg cttcttcctg aaagccccga gtgaagcatt ctcctggttc
2881 taagtacagt tcattagctc cccggtttcc cttttctcct ccttcaagta cacagataac
2941 taatctaaaa tagggccttc ccagtccgaa ccgttggtat caagtacaca ggagtgccat
3001 agccttgaat ctaattacct agtactttga ataaatctgg aaagactagt atgcttgcaa
3061 gatgatacaa atgtataaaa taaacattta aattataaaa aaaaaaaaaa aaaa
//