LOCUS BC009794 1492 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens vasoactive intestinal peptide, mRNA (cDNA clone
MGC:13587 IMAGE:4294373), complete cds.
ACCESSION BC009794
VERSION BC009794.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1492)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1492)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37588852.
FEATURES Location/Qualifiers
source 1..1492
/db_xref="H-InvDB:HIT000034583"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13587 IMAGE:4294373"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1492
/gene="VIP"
/gene_synonym="MGC13587"
/gene_synonym="PHM27"
/db_xref="GeneID:7432"
/db_xref="HGNC:HGNC:12693"
/db_xref="MIM:192320"
CDS 179..688
/gene="VIP"
/gene_synonym="MGC13587"
/gene_synonym="PHM27"
/codon_start=1
/product="vasoactive intestinal peptide"
/protein_id="AAH09794.1"
/db_xref="GeneID:7432"
/db_xref="HGNC:HGNC:12693"
/db_xref="MIM:192320"
/translation="MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFE
GANEPDQVSLKEDIDMLQNALAENDTPYYDVSRNARHADGVFTSDFSKLLGQLSAKKY
LESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQMAVKKYLNSILNGKRSSEGES
PDFPEELEK"
BASE COUNT 523 a 266 c 286 g 417 t
ORIGIN
1 ggggaggggt agagtgagaa gcaccagcag gcagtaacag ccaaccctta gccattgcta
61 agggcagaga actggtggag cctttctctt actcccagga cttcagcacc taagacagct
121 ccaaaacaaa ccagaacagt cagctccggg ggagcacgac tgggcgagag gcacagaaat
181 ggacaccaga aataaggccc agctccttgt gctcctgact cttctcagtg tgctcttctc
241 acagacttcg gcatggcctc tttacagggc accttctgct ctcaggttgg gtgacagaat
301 accctttgag ggagcaaatg aacctgatca agtttcatta aaagaagaca ttgacatgtt
361 gcaaaatgca ttagctgaaa atgacacacc ctattatgat gtatccagaa atgccaggca
421 tgctgatgga gttttcacca gtgacttcag taaactcttg ggtcaacttt ctgccaaaaa
481 gtaccttgag tctcttatgg gaaaacgtgt tagtaacatc tcagaagacc ctgtaccagt
541 caaacgtcac tcagatgcag tcttcactga caactatacc cgccttagaa aacaaatggc
601 tgtaaagaaa tatttgaact caattctgaa tggaaagagg agcagtgagg gagaatctcc
661 cgactttcca gaagagttag aaaaatgatg aaaaagacct ttggagcaaa gctgatgaca
721 acttcccagt gaattcttga aggaaaatga tacgcaacat aattaaattt tgagttctac
781 ataagtaatt caagaaaaca acttcaatat ccaaaccaaa taaaaatatt gtgttgtgaa
841 tgttgtgatg tattctagct aatgtaataa ctgtgaagtt tacattgtaa atagtatttg
901 agagttctaa attttgtctt taactcataa aaagcctgca atttcatatg ctgtatatcc
961 tttctaacaa aaaaatatat ttaatgataa gtaaatgcta ggttaattcc aattatatga
1021 gacgtttttg gaagagtagt aatagagcaa aattgatgtg tttatttata gagtgtactt
1081 aactattcag gagagtagaa cagataatca gtgtgtctaa atttgaatgt taagcagatg
1141 gaatgctgtg ttaaataaac ctcaaaatgt ctaagatagt aacaatgaag ataaaaagac
1201 attcttccaa aaagattttc agaaaatatt atgtgtttcc atattttata ggcaaccttt
1261 atttttaatg gtgttttaaa aaatctcaaa tttggattgc taatcaccaa aggctctctc
1321 ctgatagtct ttcagttaag gagaacgacc cctgcttctg acactgaaac ttccctttct
1381 gcttgtgtta agtatgtgta aaatgtgaag tgaatgaaac actcagttgt tcaataataa
1441 atatttttgc cataatgact cacaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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