LOCUS BC009759 1880 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Rho GDP dissociation inhibitor (GDI) alpha, mRNA (cDNA
clone MGC:11215 IMAGE:3935956), complete cds.
ACCESSION BC009759
VERSION BC009759.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1880)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1880)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC009759.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1880
/db_xref="H-InvDB:HIT000034554"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11215 IMAGE:3935956"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1880
/gene="ARHGDIA"
/gene_synonym="RHOGDI"
/gene_synonym="RHOGDI-1"
/db_xref="GeneID:396"
/db_xref="HGNC:HGNC:678"
/db_xref="MIM:601925"
CDS 58..672
/gene="ARHGDIA"
/gene_synonym="RHOGDI"
/gene_synonym="RHOGDI-1"
/codon_start=1
/product="Rho GDP dissociation inhibitor (GDI) alpha"
/protein_id="AAH09759.1"
/db_xref="GeneID:396"
/db_xref="HGNC:HGNC:678"
/db_xref="MIM:601925"
/translation="MAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQKSIQEIQELDKD
DESLRKYKEALLGRVAVSADPNVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSF
VLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLT
PVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDWKD"
BASE COUNT 380 a 644 c 536 g 320 t
ORIGIN
1 ggatcctgaa ccgcgcggcc gaaccctccg gtgtcccgac ccaggctaag cttgagcatg
61 gctgagcagg agcccacagc cgagcagctg gcccagattg cagcggagaa cgaggaggat
121 gagcactcgg tcaactacaa gcccccggcc cagaagagca tccaggagat ccaggagctg
181 gacaaggacg acgagagcct gcgaaagtac aaggaggccc tgctgggccg cgtggccgtt
241 tccgcagacc ccaacgtccc caacgtcgtg gtgactggcc tgaccctggt gtgcagctcg
301 gccccgggcc ccctggagct ggacctgacg ggcgacctgg agagcttcaa gaagcagtcg
361 tttgtgctga aggagggtgt ggagtaccgg ataaaaatct ctttccgggt taaccgagag
421 atagtgtccg gcatgaagta catccagcat acgtacagga aaggcgtcaa gattgacaag
481 actgactaca tggtaggcag ctatgggccc cgggccgagg agtacgagtt cctgaccccc
541 gtggaggagg cacccaaggg tatgctggcc cggggcagct acagcatcaa gtcccgcttc
601 acagacgacg acaagaccga ccacctgtcc tgggagtgga atctcaccat caagaaggac
661 tggaaggact gagcccagcc agaggcgggc agggcagact gacggacgga cgacggacag
721 gcggatgtgt cccccccagc ccctcccctc cccataccaa agtgctgaca ggccctccgt
781 gcccctccca ccctggtccg cctccctggc ctggctcaac cgagtgcctc cgacccccct
841 cctcagccct cccccaccca caggcccagc ctcctcggtc tcctgtctcg ttgctgcttc
901 tgcctgtgct gtgggggaga gaggccgcag ccaggcctct gctgcccttt ctgtgccccc
961 caggttctat ctccccgtca cacccgaggc ctggcttcag gagggagcgg agcagccatt
1021 ctccaggccc cgtggttgcc cctggacgtg tgcgtctgct gctccggggt ggagctgggg
1081 tgtgggatgc acggcctcgt gggggccggg ccgtcctcca gccccgctgc tccctggcca
1141 gcccccttgt cgctgtcggt cccgtctaac catgatgcct taacatgtgg agtgtaccgt
1201 ggggcctcac tagcctctaa ctccctgtgt ctgcatgagc atgtggcctc cccgtccctt
1261 ccccggtggc gaacccagtg acccagggac acgtggggtg tgctgctgct gctccccagc
1321 ccaccagtgc ctggccagcc tgcccccttc cctggacagg gctgtggaga tggctccggc
1381 ggcttgggga aagccaaatt gccaaaactc aagtcacctc agtaccatcc aggaggctgg
1441 gtattgtcct gcctctgcct tttctgtctc agcgggcagt gcccagagcc cacacccccc
1501 caagagccct cgatggacag cctcacccac cccacctggg cccagccagg agccccgcct
1561 ggccatcagt atttattgcc tccgtccgtg ccgtccctgg gccactggcc tggcgcctgt
1621 tcccccaggc tctcagtgcc accacccccg gcaggccttc cctgacccag ccaggaacaa
1681 acaagggacc aagtgcacac attgctgaga gccgtctcct gtgcctcccc cgccccatcc
1741 ccggtcttcg tgttgtgtct gccaggctca ggcagaggcg cctgtccctg cttcttttct
1801 gaccgggaaa taaatgcccc tgaaggaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa
//