LOCUS BC009739 1502 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1, mRNA (cDNA clone
MGC:14571 IMAGE:4095997), complete cds.
ACCESSION BC009739
VERSION BC009739.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1502)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1502)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661869.
FEATURES Location/Qualifiers
source 1..1502
/db_xref="H-InvDB:HIT000034541"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14571 IMAGE:4095997"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1502
/gene="HERPUD1"
/gene_synonym="HERP"
/gene_synonym="KIAA0025"
/gene_synonym="Mif1"
/gene_synonym="SUP"
/db_xref="GeneID:9709"
/db_xref="MIM:608070"
CDS 99..797
/gene="HERPUD1"
/gene_synonym="HERP"
/gene_synonym="KIAA0025"
/gene_synonym="Mif1"
/gene_synonym="SUP"
/codon_start=1
/product="HERPUD1 protein"
/protein_id="AAH09739.1"
/db_xref="GeneID:9709"
/db_xref="MIM:608070"
/translation="MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRV
YPERPRPEDQRLIYSGKLLLDHQCLRDLLPKEKRHVLHLVCNVKSPSKMPEINAKVAE
STEEPAGSNRGQYPEDSSSDGLRQREVLRNLSSPGWENISRHHVGWFPFRPRPVQNFP
NDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGEQTSPSFMSTAWLVFKTF
FASLLPEGPPAIAN"
BASE COUNT 469 a 321 c 351 g 361 t
ORIGIN
1 agagacgtga acggtcgttg cagagattgc gggcggctga gacgccgcct gcctggcacc
61 taggagcgca gcggagcccc gacaccgccg ccgccgccat ggagtccgag accgaacccg
121 agcccgtcac gctcctggtg aagagcccca accagcgcca ccgcgacttg gagctgagtg
181 gcgaccgcgg ctggagtgtg ggccacctca aggcccacct gagccgcgtc taccccgagc
241 gtccgcgtcc agaggaccag aggttaattt attctgggaa gctgttgttg gatcaccaat
301 gtctcaggga cttgcttcca aaggaaaaac ggcatgtttt gcatctggtg tgcaatgtga
361 agagtccttc aaaaatgcca gaaatcaacg ccaaggtggc tgaatccaca gaggagcctg
421 ctggttctaa tcggggacag tatcctgagg attcctcaag tgatggttta aggcaaaggg
481 aagttcttcg gaacctttct tcccctggat gggaaaacat ctcaaggcat cacgttgggt
541 ggtttccatt tagaccgagg ccggttcaga acttcccaaa tgatggtcct cctcctgacg
601 ttgtaaatca ggaccccaac aataacttac aggaaggcac tgatcctgaa actgaagacc
661 ccaaccacct ccctccagac agggatgtac tagatggcga gcagaccagc ccctccttta
721 tgagcacagc atggcttgtc ttcaagactt tctttgcctc tcttcttcca gaaggccccc
781 cagccatcgc aaactgatgg tgtttgtgct gtagctgttg gaggctttga caggaatgga
841 ctggatcacc tgactccagc tagattgcct ctcctggaca tggcaatgat gagtttttaa
901 aaaacagtgt ggatgatgat atgcttttgt gagcaagcaa aagcagaaac gtgaagccgt
961 gatacaaatt ggtgaacaaa aaatgcccaa ggcttctcat gtctttattc tgaagagctt
1021 taatatatac tctatgtagt ttaataagca ctgtacgtag aaggccttag gtgttgcatg
1081 tctatgcttg aggaactttt ccaaatgtgt gtgtctgcat gtgtgtttgt acatagaagt
1141 catagatgca gaagtggttc tgctggtacg atttgattcc tgttggaatg tttaaattac
1201 actaagtgta ctactttata taatcaatga aattgctaga catgttttag caggactttt
1261 ctaggaaaga cttatgtata attgcttttt aaaatgcagt gctttacttt aaactaaggg
1321 gaactttgcg gaggtgaaaa cctttgctgg gttttctgtt caataaagtt ttactatgaa
1381 tgaccctgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aa
//