LOCUS BC009696 678 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon induced transmembrane protein 2 (1-8D),
mRNA (cDNA clone MGC:9196 IMAGE:3876542), complete cds.
ACCESSION BC009696
VERSION BC009696.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 678)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 678)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10835237.
FEATURES Location/Qualifiers
source 1..678
/db_xref="H-InvDB:HIT000034511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9196 IMAGE:3876542"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..678
/gene="IFITM2"
/gene_synonym="1-8D"
/db_xref="GeneID:10581"
/db_xref="HGNC:HGNC:5413"
/db_xref="MIM:605578"
CDS 31..429
/gene="IFITM2"
/gene_synonym="1-8D"
/codon_start=1
/product="interferon induced transmembrane protein 2
(1-8D)"
/protein_id="AAH09696.1"
/db_xref="GeneID:10581"
/db_xref="HGNC:HGNC:5413"
/db_xref="MIM:605578"
/translation="MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGAPHNPAPPTSTV
IHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTA
KCLNIWALILGIFMTILLVIIPVLVVQAQR"
BASE COUNT 146 a 231 c 148 g 153 t
ORIGIN
1 atcccggtaa cccgaccgcc gctggtcacc atgaaccaca ttgtgcaaac cttctctcct
61 gtcaacagcg gccagcctcc caactacgag atgctcaagg aggagcagga agtggctatg
121 ctgggggcgc cccacaaccc tgctcccccg acgtccaccg tgatccacat ccgcagcgag
181 acctccgtgc ctgaccatgt cgtctggtcc ctgttcaaca ccctcttcat gaacacctgc
241 tgcctgggct tcatagcatt cgcctactcc gtgaagtcta gggacaggaa gatggttggc
301 gacgtgaccg gggcccaggc ctatgcctcc accgccaagt gcctgaacat ctgggccctg
361 attttgggca tcttcatgac cattctgctc gtcatcatcc cagtgttggt cgtccaggcc
421 cagcgataga tcaggaggca tcattgaggc caggagctct gcccgtgacc tgtatcccac
481 gtactctatc ttccattcct cgccctgccc ccagaggcca ggagctctgc ccttgacctg
541 tattccactt actccacctt ccattcctcg ccctgtcccc acagccgagt cctgcatcag
601 ccctttatcc tcacacgctt ttctacaatg gcattcaata aagtgtatat gtttctggta
661 aaaaaaaaaa aaaaaaaa
//