LOCUS BC009692 460 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens vacuolar protein sorting 4 homolog B (S. cerevisiae),
mRNA (cDNA clone IMAGE:3892403), partial cds.
ACCESSION BC009692
VERSION BC009692.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC009692.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17865801.
FEATURES Location/Qualifiers
source 1..460
/db_xref="H-InvDB:HIT000087359"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3892403"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>460
/gene="VPS4B"
/gene_synonym="MIG1"
/gene_synonym="VPS4-2"
/db_xref="GeneID:9525"
/db_xref="HGNC:HGNC:10895"
/db_xref="MIM:609983"
CDS 218..>460
/gene="VPS4B"
/gene_synonym="MIG1"
/gene_synonym="VPS4-2"
/codon_start=1
/product="VPS4B protein"
/protein_id="AAH09692.1"
/db_xref="GeneID:9525"
/db_xref="HGNC:HGNC:10895"
/db_xref="MIM:609983"
/translation="MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV
VKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKKKK"
BASE COUNT 125 a 112 c 128 g 95 t
ORIGIN
1 agagggcctc gggattgcgg aagtttggtg gggagggtcg gagctctggt ggagagagtg
61 ttgtctaaaa caagttccgg aagggaggct gcccttcgcg gtccgagaac caccggcctc
121 cccagtttga gggctgttac cccgtgcgcg cttcgacgtt gctgctgttg gctctcctcg
181 cccctcgttc ccttgggaac cgcctgggaa ctccgccatg tcatccactt cgcccaacct
241 ccagaaagcg atagatctgg ctagcaaagc agcgcaagaa gacaaggctg ggaactacga
301 agaagccctt cagctctatc agcatgctgt gcagtatttt cttcatgtcg ttaaatatga
361 agcacagggt gataaagcca agcaaagtat cagggcaaag tgtacagaat atcttgatag
421 agcagaaaaa ctaaaggagt acctgaaaaa aaaaaaaaaa
//