LOCUS BC009589 1186 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens C1D nuclear receptor co-repressor, mRNA (cDNA clone
MGC:14659 IMAGE:4102498), complete cds.
ACCESSION BC009589
VERSION BC009589.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27894372.
FEATURES Location/Qualifiers
source 1..1186
/db_xref="H-InvDB:HIT000034455"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14659 IMAGE:4102498"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1186
/gene="C1D"
/gene_synonym="LRP1"
/gene_synonym="SUN-CoR"
/gene_synonym="SUNCOR"
/db_xref="GeneID:10438"
/db_xref="HGNC:HGNC:29911"
/db_xref="MIM:606997"
CDS 50..475
/gene="C1D"
/gene_synonym="LRP1"
/gene_synonym="SUN-CoR"
/gene_synonym="SUNCOR"
/codon_start=1
/product="C1D nuclear receptor co-repressor"
/protein_id="AAH09589.1"
/db_xref="GeneID:10438"
/db_xref="HGNC:HGNC:29911"
/db_xref="MIM:606997"
/translation="MAGEEINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELL
QKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITD
KKKAGKLDRGAASRFVKNALWEPKSKNASKVANKGKSKS"
BASE COUNT 409 a 174 c 222 g 381 t
ORIGIN
1 cccgaccgct ttccgggaga ctggagtcga aggccgtgag tcagccataa tggcaggtga
61 agaaattaat gaagactatc cagtagaaat tcacgagtat ttgtcagcgt ttgagaattc
121 cattggtgct gtggatgaga tgctgaagac catgatgtct gtttctagaa atgagttgtt
181 gcagaagttg gatccacttg aacaagcaaa agtggatttg gtttctgcat acacattaaa
241 ttcaatgttt tgggtttatt tggcaaccca aggagttaat cctaaggaac atccagtaaa
301 acaggaattg gaaagaatca gagtatatat gaacagagtc aaggaaataa cagacaagaa
361 aaaggctggc aagctggaca gaggtgcagc ttcaagattt gtaaaaaatg ccctctggga
421 accaaaatcg aaaaatgcat caaaagttgc caataaagga aaaagtaaaa gttaactttt
481 tggttttgat gtacacatat tcaaaaagta catcttcccc cccccccccc cccgcaaaat
541 aattctgtgg cagggcaagg tttaaatgtg tttcttatta atatgtaaat tcacagtaaa
601 tatgtaaagc taaatacttt cctctccaaa gatcattatc tttattgatt agcactgagg
661 attttaacat tgtgatatat tatatattta taatttacca tctcttgatg agactcttat
721 ttctttatat aggtcagtct tgcaagtacc attttataag cagctgtgaa atttaagtga
781 aatgttcttt gtaaacattt gtactatttt aaatgaataa tgaccttatg aagtatgcta
841 tctgtaggct gaaattatag gtacatctgt tttcactata tgatattaag aaagcgtgaa
901 atgacttaaa tgttcatttt tttctgtata gatactttat catgttttca tgattttagg
961 aattactgct ttgttgatat tcaaagtgtg aaactaaaac tttatggttg tactttaatt
1021 cttggcatgt tgcctctatg tcccatttaa aataaaatac attctcatta actttagatg
1081 ggaaataagg ttgtatgttg atggatgaat tttggcatga tgactgtact ctcaataaag
1141 gctgaaaatg ttgtataaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//