LOCUS BC009529 819 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high mobility group nucleosomal binding domain 3, mRNA
(cDNA clone MGC:10048 IMAGE:3890883), complete cds.
ACCESSION BC009529
VERSION BC009529.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 819)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 819)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC009529.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23238229.
FEATURES Location/Qualifiers
source 1..819
/db_xref="H-InvDB:HIT000034425"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10048 IMAGE:3890883"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..819
/gene="HMGN3"
/gene_synonym="PNAS-24"
/gene_synonym="PNAS-25"
/db_xref="GeneID:9324"
/db_xref="HGNC:HGNC:12312"
/db_xref="MIM:604502"
CDS 107..340
/gene="HMGN3"
/gene_synonym="PNAS-24"
/gene_synonym="PNAS-25"
/codon_start=1
/product="high mobility group nucleosomal binding domain
3"
/protein_id="AAH09529.1"
/db_xref="GeneID:9324"
/db_xref="HGNC:HGNC:12312"
/db_xref="MIM:604502"
/translation="MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPR
KTSAKKEPGAKISRGAKGKKEEKQEAGKEGTEN"
BASE COUNT 265 a 141 c 182 g 231 t
ORIGIN
1 gtcgtgccct gcgcgtgagc agctgcagcg gcagaggcag catccagcgg cggcgccagc
61 agttccagtc cgttgcttta ctttttgctt caccgacata gtcattatgc cgaagagaaa
121 gtctccagag aatacagagg gcaaagatgg atccaaagta actaaacagg agcccacaag
181 acggtctgcc agattgtcag cgaaacctgc tccaccaaaa cctgaaccca aaccaagaaa
241 aacatctgct aagaaagaac ctggagcaaa gattagcaga ggtgctaaag ggaagaagga
301 ggaaaagcag gaagctggaa aggaaggcac agaaaactga atctgtagat aacgagggag
361 aatgaattgt catgaaaaat tggggttgat tttatgtatc tcttgggaca acttttaaaa
421 gctattttta ccaagtattt tgtaaatgct aattttttag gactctacta gttggcatac
481 gaaaatatat aaggatggac attttatcgt ctcatagtca tgctttttgg aaatttacat
541 catcctcaag taaaataaat atcagttaaa tattggaagc tgtgtgtaag attgattcag
601 cattccatgc acttgcttta aaatttagtc ctgtgcatac tgtggtgttt ttactgtgca
661 tatttgaatt tttcatgcag tttttctaga gcaataatca gtggtgcttt tgtacctagg
721 ttttatgtga ttttaatgaa acatggatag ttgtggccac ctgctgacta tttgtggttt
781 aaaataaaag gtttacttgt ctgcaaaaaa aaaaaaaaa
//