LOCUS BC009400 1992 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens chromosome 3 open reading frame 23, mRNA (cDNA clone
IMAGE:4132043), complete cds.
ACCESSION BC009400
VERSION BC009400.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1992)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1992)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009400.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: l Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 71067088
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1992
/db_xref="H-InvDB:HIT000087271"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4132043"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1992
/gene="C3orf23"
/gene_synonym="DKFZp313N0621"
/db_xref="GeneID:285343"
/db_xref="HGNC:HGNC:25241"
CDS 224..436
/gene="C3orf23"
/gene_synonym="DKFZp313N0621"
/codon_start=1
/product="chromosome 3 open reading frame 23"
/protein_id="AAH09400.2"
/db_xref="GeneID:285343"
/db_xref="HGNC:HGNC:25241"
/translation="MFCHLRPMRRLCLEKIFPHWFPFSRALSGAEAVNALRPFYFAVH
PDFFGQHPVERDDTWKSFQCPSDFSL"
BASE COUNT 590 a 414 c 387 g 601 t
ORIGIN
1 cttcttcccc aagatccagc gcgtgctcgg ttgcccttct ccgttccttg caggcccttg
61 ggtcaggacc caccacctgc cggaccatca ttttccgagt ccctccggcc tagtcggagt
121 gctcgctcgc gcctcctaaa gctctcagcc gagcgcgccg agacccctca gggcggccgc
181 aattaatgga tgcctcgaag ttgacgtaca tatatattca gaaatgtttt gccacctgag
241 acctatgagg aggttatgtc tagagaagat atttccacac tggtttccct tttcaagagc
301 tttatcggga gctgaagcag tcaatgcctt gaggcctttc tattttgcag tacatccaga
361 tttctttgga cagcaccccg tagaaaggga tgatacatgg aagagttttc aatgccctag
421 tgatttttcc ttatgatgca tgctgctgga ccactcccct acaacatcag ttaatgtgtg
481 ctccaggaat acaaactgat atgaaaaatg acttatggta gatgtagtta agacagtcaa
541 tatattttaa cattagaaaa tacagtcagt ccttcatatc catgggtttt acatccatgg
601 attcaaccaa cctcagactg aaaatattag gggaaaaaaa tacatctgta ctacacatga
661 acaaacttct ctttcttgtc attattccct gaacaacaca ggataacaac tacttacata
721 gcacttacat tatattagat attataagta atctagaaat gacttaaagt atatgggagg
781 atacacatag gttatttgca aatactacac tattttatat gagagacttg agcattcgca
841 gatttcggta tccacgggag gtcctggaac caatccccta tggataccaa gggactgcta
901 tgtattacaa agccacatgc tttggaatta cttcagtgtt ccttctattt tcattaacac
961 tgatatctag tttaatatga aaaggaactt gaaatcttga aaattagaac atcgttattt
1021 ttttctactt gcaatggaaa atctattttg cttttttgct tctaggaaaa tattctgatt
1081 atgatatgtg atatgttggc tactcaaagt cagaactttt caaagtaatc agtaaattga
1141 atcaacagaa aaatattcat taactcgggg atgcattaat aaagttttta aattcaaaat
1201 gtatagaaaa atcaagctta gtaatacttt aatattattc taccaatgta ttttttttaa
1261 ttaagacttc tgtatgcagc agggcatggt ggcacacctg tagtcccagc tactagggag
1321 gctgaggcag gaggattact tgagcccagg aattcaagcc tgggcaacat agtgagtcct
1381 catctcctaa atttaaaaaa caaacaacaa aaatttctac gtgtggtaaa gggttaactc
1441 agcaagcttg ggttgcttaa accttgcaca ttccaaagaa aggtctgacc ccagtgctga
1501 cctttgactg gctactggga aatgagctct gagcccctgg ataggaatgt ttctgtttgc
1561 ctgaggcctt tgaccatgcc agatagttta tgctaacaat gtgatttata gtgaatacct
1621 gttttcctgt gtctaagacc ctgggctgca ctgtattaat ttgaccttgg gtatttgggg
1681 agctgagact gagtagctga agtgagtcac ataagcacta aatgcttacc tgactgaccc
1741 ccagtaaaac tctggacatc cagacttgga tgagcttcct tgggtggcaa cacttttacg
1801 tattgtcaca caccattgct ggggggatta agcactgtct gtaaaactcc actgtgaaat
1861 gacaactgga aacttgcacg tggtctctcc tgattctgct ctattcacct tttccctttg
1921 ctgattttaa tctctattct tttgttgtaa taaaccataa tggtgaataa aaaaaaaaaa
1981 aaaaaaaaaa aa
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