LOCUS BC009322 2380 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens heat shock 70kDa protein 1A, mRNA (cDNA clone
MGC:15236 IMAGE:4123837), complete cds.
ACCESSION BC009322
VERSION BC009322.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2380)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2380)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC009322.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: e Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26787973.
FEATURES Location/Qualifiers
source 1..2380
/db_xref="H-InvDB:HIT000034281"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15236 IMAGE:4123837"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2380
/gene="HSPA1A"
/gene_synonym="HSP70-1"
/gene_synonym="HSP72"
/gene_synonym="HSPA1B"
/db_xref="GeneID:3303"
/db_xref="HGNC:HGNC:5232"
/db_xref="MIM:140550"
CDS 41..1966
/gene="HSPA1A"
/gene_synonym="HSP70-1"
/gene_synonym="HSP72"
/gene_synonym="HSPA1B"
/codon_start=1
/product="HSPA1A protein"
/protein_id="AAH09322.1"
/db_xref="GeneID:3303"
/db_xref="HGNC:HGNC:5232"
/db_xref="MIM:140550"
/translation="MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF
TDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPK
VQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKD
AGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFE
VKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS
STQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL
VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLL
LLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMT
KDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKG
RLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEAD
KKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGA
QGPKGGSGSGPTIEEVD"
BASE COUNT 568 a 643 c 725 g 444 t
ORIGIN
1 ccccagtctc agagcggagc ccacagagca gggcaccggc atggccaaag ccgcggcgat
61 cggcatcgac ctgggcacca cctactcctg cgtgggggtg ttccaacacg gcaaggtgga
121 gatcatcgcc aacgaccagg gcaaccgcac cacccccagc tacgtggcct tcacggacac
181 cgagcggctc atcggggatg cggccaagaa ccaggtggcg ctgaacccgc agaacaccgt
241 gtttgacgcg aagcggctga tcggccgcaa gttcggcgac ccggtggtgc agtcggacat
301 gaagcactgg cctttccagg tgatcaacga cggagacaag cccaaggtgc aggtgagcta
361 caagggggag accaaggcat tctaccccga ggagatctcg tccatggtgc tgaccaagat
421 gaaggagatc gccgaggcgt acctgggcta cccggtgacc aacgcggtga tcaccgtgcc
481 ggcctacttc aacgactcgc agcgccaggc caccaaggat gcgggtgtga tcgcggggct
541 caacgtgctg cggatcatca acgagcccac ggccgccgcc atcgcctacg gcctggacag
601 aacgggcaag ggggagcgca acgtgctcat ctttgacctg ggcgggggca ccttcgacgt
661 gtccatcctg acgatcgacg acggcatctt cgaggtgaag gccacggccg gggacaccca
721 cctgggtggg gaggactttg acaacaggct ggtgaaccac ttcgtggagg agttcaagag
781 aaaacacaag aaggacatca gccagaacaa gcgagccgtg aggcggctgc gcaccgcctg
841 cgagagggcc aagaggaccc tgtcgtccag cacccaggcc agcctggaga tcgactccct
901 gtttgagggc atcgacttct acacgtccat caccagggcg aggttcgagg agctgtgctc
961 cgacctgttc cgaagcaccc tggagcccgt ggagaaggct ctgcgcgacg ccaagctgga
1021 caaggcccag attcacgacc tggtcctggt cgggggctcc acccgcatcc ccaaggtgca
1081 gaagctgctg caagacttct tcaacgggcg cgacctgaac aagagcatca accccgacga
1141 ggctgtggcc tacggggcgg cggtgcaggc ggccatcctg atgggggaca agtccgagaa
1201 cgtgcaggac ctgctgctgc tggacgtggc tcccctgtcg ctggggctgg agacggccgg
1261 aggcgtgatg actgccctga tcaagcgcaa ctccaccatc cccaccaagc agacgcagat
1321 cttcaccacc tactccgaca accaacccgg ggtgctgatc caggtgtacg agggcgagag
1381 ggccatgacg aaagacaaca atctgttggg gcgcttcgag ctgagcggca tccctccggc
1441 ccccaggggc gtgccccaga tcgaggtgac cttcgacatc gatgccaacg gcatcctgaa
1501 cgtcacggcc acggacaaga gcaccggcaa ggccaacaag atcaccatca ccaacgacaa
1561 gggccgcctg agcaaggagg agatcgagcg catggtgcag gaggcggaga agtacaaagc
1621 ggaggacgag gtgcagcgcg agagggtgtc agccaagaac gccctggagt cctacgcctt
1681 caacatgaag agcgccgtgg aggatgaggg gctcaagggc aagatcagcg aggcggacaa
1741 gaagaaggtt ctggacaagt gtcaagaggt catctcgtgg ctggacgcca acaccttggc
1801 cgagaaggac gagtttgagc acaagaggaa ggagctggag caggtgtgta accccatcat
1861 cagcggactg taccagggtg ccggtggtcc cgggcctggg ggcttcgggg ctcagggtcc
1921 caagggaggg tctgggtcag gccctaccat tgaggaggtg gattaggggc ctttgttctt
1981 tagtatgttt gtctttgagg tggactgttg ggactcaagg actttgctgc tgttttccta
2041 tgtcatttct gcttcagctc tttgctgctt cacttctttg taaagttgta acctgatggt
2101 aattagctgg cttcattatt tttgtagtac aaccgatatg ttcattagaa ttctttgcat
2161 ttaatgttga tactgtaagg gtgtttcgtt ccctttaaat gaatcaacac tgccaccttc
2221 tgtacgagtt tgtttgtttt tttttttttt ttttttttgc ttggcgaaaa cactacaaag
2281 gctgggaatg tatgttttta taatttgttt atttaaatat gaaaaataaa atgttaaact
2341 ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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