LOCUS BC009309 1884 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GABA(A) receptor-associated protein like 1, mRNA (cDNA
clone MGC:16572 IMAGE:4100219), complete cds.
ACCESSION BC009309
VERSION BC009309.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1884)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1884)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009309.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56676368.
FEATURES Location/Qualifiers
source 1..1884
/db_xref="H-InvDB:HIT000034272"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16572 IMAGE:4100219"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1884
/gene="GABARAPL1"
/gene_synonym="APG8L"
/gene_synonym="ATG8"
/gene_synonym="GEC1"
/db_xref="GeneID:23710"
/db_xref="HGNC:HGNC:4068"
/db_xref="MIM:607420"
CDS 238..591
/gene="GABARAPL1"
/gene_synonym="APG8L"
/gene_synonym="ATG8"
/gene_synonym="GEC1"
/codon_start=1
/product="GABA(A) receptor-associated protein like 1"
/protein_id="AAH09309.1"
/db_xref="GeneID:23710"
/db_xref="HGNC:HGNC:4068"
/db_xref="MIM:607420"
/translation="MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDL
DKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEED
YFLYVAYSDESVYGK"
BASE COUNT 484 a 425 c 487 g 488 t
ORIGIN
1 ctctagcgaa aagccgccgg tatttctcca tctggctctc ctctacctcc aggcaggctc
61 acccgagatc cccgccccga accccccctg cacactcggc ccagcgctgt tgcccccgga
121 gcggacgttt ctgcagctat tctgagcaca ccttgacgtc ggctgaggga gcgggacagg
181 gtcagcggcg aaggaggcag gccccgcgcg gggatctcgg aagccctgcg gtgcatcatg
241 aagttccagt acaaggagga ccatcccttt gagtatcgga aaaaggaagg agaaaagatc
301 cggaagaaat atccggacag ggtccccgtg attgtagaga aggctccaaa agccagggtg
361 cctgatctgg acaagaggaa gtacctagtg ccctctgacc ttactgttgg ccagttctac
421 ttcttaatcc ggaagagaat ccacctgaga cctgaggacg ccttattctt ctttgtcaac
481 aacaccatcc ctcccaccag tgctaccatg ggccaactgt atgaggacaa tcatgaggaa
541 gactattttc tgtatgtggc ctacagtgat gagagtgtct atgggaaatg agtggttgga
601 agcccagcag atgggagcac ctggacttgg gggtagggga ggggtgtgtg tgcgcgacat
661 ggggaaagag ggtggctccc accgcaagga gacagaaggt gaagacatct agaaacatta
721 caccacacac accgtcatca cattttcaca tgctcaattg atattttttg ctgcttcctc
781 ggcccaggga gaaagcatgt caggacagag ctgttggatt ggctttgata gaggaatggg
841 gatgatgtaa gtttacagta ttcctggggt ttaattgttg tgcagtttca tagatgggtc
901 aggaggtgga caagttgggg ccagagatga tggcagtcca gcagcaactc cctgtgctcc
961 cttctctttg ggcagagatt ctatttttga catttgcaca agacaggtag ggaaagggga
1021 cttgtggtag tggaccatac ctggggacca aaagagaccc actgtaattg atgcattgtg
1081 gcccctgatc ttccctgtct cacacttctt ttctcccatc ccggttgcaa tctcactcag
1141 acatcacagt accaccccag gggtggcagt agacaacaac ccagaaattt agacagggat
1201 ctcttacctt tggaaaatag gggttaggca tgaaggtggt tgtgattaag aagatggttt
1261 tgttattaaa tagcattaaa ctggaattga caagagtgtt gagcatccct gtctaacctg
1321 ctctttctct ttggtgcccc ttatctcacc ccttccttgg aatttaataa gtctcaggca
1381 tttccaattg tagactaaaa ccactcttag catctcctct agtattttcc atgtatcagg
1441 aaagaggtgt cttatgtagg gagggggcaa gtatgaagta aggtaattat atactactct
1501 cattcaggat tcttgctccc atgctgctgt cccttcaggc tcacatgcac aggaatgcta
1561 catgatggcc agctgcttcc ctccttggtt atcatccact gcagctgcta gttagaaagg
1621 tttggaggga tgacttttag taaatcatgg ggattttatt gatttatttt cacttttggg
1681 attttgtggg gtgggagtgg ggagcaggaa ttgcactcag acatgacatt tcaattcatc
1741 tctgctaatg aaaagggttc tttctcttgg gggaaatgtg tgtgtcagtt ctgtcagctg
1801 caagttcttg tataatgaag tcaatgccat caggccaagg aaataaaata attgcttacc
1861 ttaaaaaaaa aaaaaaaaaa aaaa
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