LOCUS BC009292 1628 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 4
(Arabidopsis), mRNA (cDNA clone MGC:15160 IMAGE:4111685), complete
cds.
ACCESSION BC009292
VERSION BC009292.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1628)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1628)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC009292.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38373689.
FEATURES Location/Qualifiers
source 1..1628
/db_xref="H-InvDB:HIT000034261"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15160 IMAGE:4111685"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1628
/gene="COPS4"
/gene_synonym="MGC10899"
/gene_synonym="MGC15160"
/db_xref="GeneID:51138"
/db_xref="HGNC:HGNC:16702"
CDS 3..1223
/gene="COPS4"
/gene_synonym="MGC10899"
/gene_synonym="MGC15160"
/codon_start=1
/product="COP9 constitutive photomorphogenic homolog
subunit 4 (Arabidopsis)"
/protein_id="AAH09292.1"
/db_xref="GeneID:51138"
/db_xref="HGNC:HGNC:16702"
/translation="MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEA
LKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQ
VASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDD
PVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVH
ESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGN
QLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAK
AEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNLLEKISQTA
PEWTAQAMEAQMAQ"
BASE COUNT 532 a 303 c 344 g 449 t
ORIGIN
1 agatggcggc agccgtgcga caggatttgg cccagctcat gaattcgagc ggctctcata
61 aagatctggc tggcaagtat cgtcagatcc tggaaaaagc cattcagtta tctggagcag
121 aacaactaga agctttgaaa gcttttgtgg aagcaatggt aaatgagaat gtcagtctcg
181 tgatctcgcg gcagttgctg actgattttt gcacacatct tcctaacttg cctgatagca
241 cagccaaaga aatctatcac ttcaccttgg aaaagatcca gcctagagtc atttcatttg
301 aggagcaggt tgcttccata agacagcatc ttgcatctat atatgagaaa gaagaagatt
361 ggagaaatgc agcccaagtg ttggtgggaa ttcctttgga aacaggacaa aaacagtaca
421 atgtagatta taaactggag acttacttga agattgctag gctatatctg gaggatgatg
481 atccagtcca ggcagaggct tacataaatc gagcatcgtt gcttcagaat gaatcaacca
541 atgaacaatt acagatacat tataaggtat gctatgcacg tgttcttgat tatagaagaa
601 aattcattga agctgcacaa aggtacaatg agctctctta caagacaata gtccacgaaa
661 gtgaaagact agaggcctta aaacatgctt tgcactgtac gatcttagca tcagcagggc
721 agcagcgttc tcggatgcta gctactcttt ttaaggatga aaggtgccag caacttgctg
781 cctatgggat cctagagaaa atgtatctag ataggatcat cagaggaaat caacttcaag
841 aatttgctgc catgctgatg cctcaccaaa aagcaactac agctgatggt tccagcatct
901 tggacagagc tgttattgaa cacaatttgt tgtctgcaag caaattatat aataatatta
961 ccttcgaaga acttggagct cttttagaga tccctgcagc taaggcggaa aagatagcat
1021 ctcaaatgat aaccgaagga cgtatgaatg gatttattga ccagattgat ggaatagttc
1081 attttgaaac acgagaagcc ctgccaacgt gggataagca gatccaatca ctttgtttcc
1141 aagtgaataa ccttttggag aaaattagtc aaacagcacc agaatggaca gcacaagcca
1201 tggaagccca gatggctcag tgaatccttg cagaacttct gtgcacatga catctttttc
1261 catgttgtgc agatcagttt cactatctcc aaagcatttg catcatgacc ttatacattt
1321 caatcccttt tatgctggat tccgtttaaa gaagacatta ttagagcagg aagtacaagc
1381 atttaaaata tgtagttccc atatatttca gggtctctgt gtattaagct aactcagatg
1441 ttttgaaagc tttttcttta aacagaggtg aaatatctgt ggctaaaaag tttgagattt
1501 gtgataactt tgtagtcatg taaaacttaa gtgcttcatg cctctccaaa tgtggttatt
1561 ctaataaatg gagaaatgag ccaaataaaa gtagtacttt gtttttagtt aaaaaaaaaa
1621 aaaaaaaa
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