LOCUS BC009238 1487 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 4a, mRNA (cDNA clone MGC:2379
IMAGE:2820121), complete cds.
ACCESSION BC009238
VERSION BC009238.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1487)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1487)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC009238.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17921988.
FEATURES Location/Qualifiers
source 1..1487
/db_xref="H-InvDB:HIT000034219"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2379 IMAGE:2820121"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1487
/gene="TUBA4A"
/gene_synonym="H2-ALPHA"
/db_xref="GeneID:7277"
/db_xref="HGNC:HGNC:12407"
/db_xref="MIM:191110"
CDS 32..1378
/gene="TUBA4A"
/gene_synonym="H2-ALPHA"
/codon_start=1
/product="tubulin, alpha 4a"
/protein_id="AAH09238.1"
/db_xref="GeneID:7277"
/db_xref="HGNC:HGNC:12407"
/db_xref="MIM:191110"
/translation="MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAA
IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEGEE"
BASE COUNT 360 a 423 c 394 g 310 t
ORIGIN
1 ctcaacgtga gacgcaccgc ccggactcac catgcgtgaa tgcatctcag tccacgtggg
61 gcaggcaggt gtccagatgg gcaatgcctg ctgggagctc tattgcttgg aacatgggat
121 tcagcctgat gggcagatgc ccagtgacaa gaccattggt ggaggggacg actccttcac
181 caccttcttc tgtgaaactg gtgctggaaa acacgtaccc cgggcagttt ttgtggatct
241 ggagcctacg gtcattgatg agatccgaaa tggcccatac cgacagctct tccacccaga
301 gcagctcatc actgggaaag aggatgctgc caacaactat gcccgtggtc actataccat
361 tggcaaggag atcattgacc cagtgctgga tcggatccgc aagctgtctg accagtgcac
421 aggacttcag ggcttcctgg tgttccacag ctttggtggg ggcactggct ctggcttcac
481 ctcactcctg atggagcggc tctctgttga ctatggcaag aaatccaagc tggaattctc
541 catctaccca gccccccagg tgtctacagc cgtggtcgag ccctacaact ctatcctgac
601 cacccacacc accctggagc actcagactg tgccttcatg gtggacaacg aagcaatcta
661 tgacatctgc cgccgcaacc tagacatcga gcgcccaacc tacaccaacc tcaatcgcct
721 cattagccaa attgtctcct ccatcacagc ttctctgcgc tttgacgggg ccctcaatgt
781 ggacctgaca gagttccaga ccaacctggt gccctaccct cgcatccact tccccctggc
841 cacctatgca ccagtcatct ctgcagaaaa ggcataccac gagcagctgt cggtggcaga
901 gatcaccaat gcctgctttg agcctgccaa ccagatggta aagtgtgatc cccggcacgg
961 caagtacatg gcctgctgcc tgctgtaccg tggagatgtg gtgcccaagg atgtcaacgc
1021 tgccattgcc gccatcaaga ccaagcgcag cattcagttt gtggactggt gccccacagg
1081 cttcaaggtt ggtatcaact accagcctcc cactgtggtg cctgggggtg acctggccaa
1141 ggtgcagcgt gccgtgtgca tgctgagcaa cacgaccgcc atcgccgagg cctgggcccg
1201 cctggaccac aagttcgacc tgatgtatgc caagagggcg tttgtgcact ggtatgtggg
1261 tgagggcatg gaggagggtg agttctccga ggcccgtgag gatatggctg ccctggagaa
1321 ggattatgag gaggtgggca tcgactccta tgaggacgag gatgagggag aagaataaag
1381 cagctgcctg gagcctattc actatgttta ttgcaaaatc ctttcgaaat aaacagtttc
1441 cttgcacggt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//