LOCUS BC009227 1078 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens RAB13, member RAS oncogene family, mRNA (cDNA clone
IMAGE:3952196), partial cds.
ACCESSION BC009227
VERSION BC009227.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1078)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1078)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC009227.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..1078
/db_xref="H-InvDB:HIT000087231"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3952196"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1078
/gene="RAB13"
/db_xref="GeneID:5872"
/db_xref="MIM:602672"
CDS <1..589
/gene="RAB13"
/codon_start=2
/product="RAB13 protein"
/protein_id="AAH09227.2"
/db_xref="GeneID:5872"
/db_xref="MIM:602672"
/translation="FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDI
EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENA
SAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARD
ILLKSGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG"
misc_feature 2..493
/gene="RAB13"
/note="RAB; Region: Rab subfamily of small GTPases"
/db_xref="CDD:cd00154"
BASE COUNT 363 a 199 c 308 g 208 t
ORIGIN
1 cttcaagttg ctgctgatcg gggactcggg ggtgggcaag acttgtctga tcattcgctt
61 tgcagaggac aacttcaaca acacttacat ctccaccatc ggaattgatt tcaagatccg
121 cactgtggat atagagggga agaagatcaa actacaagtc tgggacacgg ctggccaaga
181 gcggttcaag acaataacta ctgcctacta ccgtggagcc atgggcatta tcctagtata
241 cgacatcacg gatgagaaat ctttcgagaa tattcagaac tggatgaaaa gcatcaagga
301 gaatgcctcg gctggggtgg agcgcctctt gctggggaac aaatgtgaca tggaggccaa
361 gaggaaggtg cagaaggagc aggccgataa gttggctcga gagcatggaa tccgattttt
421 cgaaactagt gctaaatcca gtatgaatgt ggatgaggct tttagttccc tggcccggga
481 catcttgctc aagtcaggag gccggagatc aggaaacggc aacaagcctc ccagtactga
541 cctgaaaact tgtgacaaga agaacaccaa caagtgctcc ctgggctgag gaccctttct
601 tgcctcccca ccccggaagc tgaacctgag ggagacaacg gcagagggag tgagcagggg
661 agaaatagca gaggggcttg gagggtcaca taggtagatg gtaaagagaa tgaggagaaa
721 aaggagaaaa gggaaaagca gaaaggaaaa aaaggaagag agaggaaggg agaagggaga
781 ggaatgaatt gaggaagtga aagaaggcaa ggaggtagga agagagggag gaggaaagga
841 aggagagatg cctcaggctt cagaccttac ctgggttttc agggcaaaca taaatgtaaa
901 tacactgatt tattctgtta ctagatcagg ttttagggtc ctgcaaaagg ctagctcggc
961 actacactag ggaatttgct cctgttctgt cacttgtcat ggtctttctt ggtattaaag
1021 gccaccattt gcacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//