LOCUS BC009185 2227 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens DNA cross-link repair 1C (PSO2 homolog, S.
cerevisiae), mRNA (cDNA clone MGC:15064 IMAGE:3945623), complete
cds.
ACCESSION BC009185
VERSION BC009185.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2227)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009185.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: h Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11968040.
FEATURES Location/Qualifiers
source 1..2227
/db_xref="H-InvDB:HIT000050505"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15064 IMAGE:3945623"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2227
/gene="DCLRE1C"
/gene_synonym="ARTEMIS"
/gene_synonym="DCLREC1C"
/gene_synonym="FLJ11360"
/gene_synonym="RS-SCID"
/gene_synonym="SCIDA"
/gene_synonym="SNM1C"
/db_xref="GeneID:64421"
/db_xref="MIM:605988"
CDS 251..1984
/gene="DCLRE1C"
/gene_synonym="ARTEMIS"
/gene_synonym="DCLREC1C"
/gene_synonym="FLJ11360"
/gene_synonym="RS-SCID"
/gene_synonym="SCIDA"
/gene_synonym="SNM1C"
/codon_start=1
/product="DCLRE1C protein"
/protein_id="AAH09185.1"
/db_xref="GeneID:64421"
/db_xref="MIM:605988"
/translation="MKHQERFLFQGNNGTVLYTGDFRLAQGEAARMELLHSGGRVKDI
QSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFT
NLSEELGVQVHVNKLDMFRNMPEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGIT
SRNRIPLHIISIKPSTMWFGERSRKTNVIVRTGESSYRACFSFHSSYSEIKDFLSYLC
PVNAYPNVIPVGTTMDKVVEILKPLCRSSQSTEPKYKPLGKLKRARTVHRDSEEEDDY
LFDDPLPIPLRHKVPYPETFHPEVFSMTAVSEKQPEKLRQTPGCCRAECMQSSRFTNF
VDCEESNSESEEEVGIPASLQGDLGSVLHLQKADGDVPQWEVFFKRNDEITDESLENF
PSSTVAGGSQSPKLFSDSDGESTHISSQNSSQSTHITEQGSQGWDSQSDTVLLSSQER
NSGDITSLDKADYRPTIKENIPASLMEQNVICPKDTYSDLKSRDKDVTIVPSTGEPTT
LSSETHIPEEKSLLNLSTNADSQSSSDFEVPSTPEAELPKREHLQYLYEKLATGESIA
VKKRKCSLLDT"
BASE COUNT 713 a 481 c 493 g 540 t
ORIGIN
1 cttcagctgc ggttttgggg tcccggactc tgggatcggc ggcgctatga gttctttcga
61 ggggcagatg gccgagtatc caactatctc catagaccgc ttcgataggg agaacctgag
121 ggcccgcgcc tacttcctgt cccactgcca caaagatcac atgaaaggat taagagcccc
181 taccttgaaa agaaggttgg agtgcagata tctattgaaa tcgagactcc tacccagata
241 tctttagtgg atgaagcatc aggagaggtt tttatttcag ggcaataatg gaactgtcct
301 gtacacagga gacttcagat tggcgcaagg agaagctgct agaatggagc ttctgcactc
361 cgggggcaga gtcaaagaca tccaaagtgt atatttggat actacgttct gtgatccaag
421 attttaccaa attccaagtc gggaggagtg tttaagtgga gtcttagagc tggtccgaag
481 ctggatcact cggagcccgt accatgttgt gtggctgaac tgcaaagcgg cttatggcta
541 tgaatatctg ttcaccaacc ttagtgaaga attaggagtc caggttcatg tgaataagct
601 agacatgttt aggaacatgc ctgagatcct tcatcatctc acaacagacc gcaacactca
661 gatccatgca tgccggcatc ccaaggcaga ggaatatttt cagtggagca aattaccctg
721 tggaattact tccagaaata gaattccact ccacataatc agcattaagc catccaccat
781 gtggtttgga gaaaggagca gaaaaacaaa tgtaattgtg aggactggag agagttcata
841 cagagcttgt ttttcttttc actcctccta cagtgagatt aaagatttct tgagctacct
901 ctgtcctgtg aacgcatatc caaatgtcat tccagttggc acaactatgg ataaagttgt
961 cgaaatctta aagcctttat gccggtcttc ccaaagtacg gagccaaagt ataaaccact
1021 gggaaaactg aagagagcta gaacagttca ccgagactca gaggaggaag atgactatct
1081 ctttgatgat cctctgccaa tacctttaag gcacaaagtt ccatacccgg aaacttttca
1141 ccctgaggta ttttcaatga ctgcagtatc agaaaagcag cctgaaaaac tgagacaaac
1201 cccaggatgc tgcagagcag agtgtatgca gagctctcgt ttcacaaact ttgtagattg
1261 tgaagaatcc aacagtgaaa gtgaagaaga agtaggaatc ccagcttcac tgcaaggaga
1321 tctgggctct gtacttcacc tgcaaaaggc tgatggggat gtaccccagt gggaagtatt
1381 ctttaaaaga aatgatgaaa tcacagatga gagtttggaa aacttccctt cctccacagt
1441 ggcaggggga tctcagtcac caaagctttt cagtgactct gatggagaat caactcacat
1501 ctcctcccag aattcttccc agtcaacaca cataacagaa caaggaagtc aaggctggga
1561 cagccaatct gatactgttt tgttatcttc ccaagagaga aacagtgggg atattacttc
1621 cttggacaaa gctgactaca gaccaacaat caaagagaat attcctgcct ctctcatgga
1681 acaaaatgta atttgcccaa aggatactta ctctgatttg aaaagcagag ataaagatgt
1741 gacaatagtt cctagtactg gagaaccaac tactctaagc agtgagacac atatacccga
1801 ggaaaaaagt ttgctaaatc ttagcacaaa tgcagattcc cagagctctt ctgattttga
1861 agttccctca actccagaag ctgagttacc taaacgagag catttacaat atttatatga
1921 gaagctggca actggtgaga gtatagcagt caaaaaaaga aaatgctcac tcttagatac
1981 ctaagaattc aaagcgtttc aacctagagc aaccactaaa aaacctgcac agagatgaca
2041 gtcaatatta caatagagaa aatacagtac ttaaaaatgt tcaaataacc tggttgggtg
2101 tggtggctca cacttgtaat cccagcactt tgaggtgggc aatggcttga gcccaggagt
2161 tcgacaccag cctggccaac acagtgaaat gtgtctctac ttacaaaaaa aaaaaaaaaa
2221 aaaaaaa
//