LOCUS BC009111 3603 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens hypothetical protein LOC552889, mRNA (cDNA clone
MGC:17296 IMAGE:3460701), complete cds.
ACCESSION BC009111
VERSION BC009111.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3603)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3603)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: h Column: 15.
FEATURES Location/Qualifiers
source 1..3603
/db_xref="H-InvDB:HIT000034173"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17296 IMAGE:3460701"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3603
/gene="LOC552889"
/db_xref="GeneID:552889"
CDS 3251..3499
/gene="LOC552889"
/codon_start=1
/product="LOC552889 protein"
/protein_id="AAH09111.1"
/db_xref="GeneID:552889"
/translation="MYLSVCVCVCVCYGGRGGFFKISVVCGFFFHTLVPTIACPGTTA
WHYRMLGSSGEGSEAHHCPLFWRFLFLHNILHPIQIAD"
BASE COUNT 879 a 809 c 884 g 1031 t
ORIGIN
1 cggtgagtcc tgggccaggc gcagctgaaa ggcccgcaac ccgggaaacg tcaaaacaaa
61 cagaaggact tgggattccg gagcagtcgc ccctatcgct gctcctgcag ttgcggacgc
121 caccgacccc gccgccggag gactgggcac tgaaaggcct ctaggcctag gcgcggcccg
181 cggagccaga cgtgttgctg ccgtgagtaa aacgagcgcc ctctccgcac tcgtttacaa
241 attaaaatgg aggaaatttc gttggccaac ctggatacta acaagctaga ggccatcgct
301 caggagattt acgtagacct gatagaggat tcttgtttgg gattctgctt tgaggtgcac
361 cgggcagtca agtgtggcta cttctacctg gagttcgcag agactggtag cgtgaaggat
421 tttggcattc agccagtgga agacaaagga gcgtgccgcc tcccgctttg ctcccttccc
481 ggagaacctg ggaatgggcc tgatcagcag ctgcagcgct cacctccgga attccagtag
541 ctgcaaaatg agagtctgaa agtggccagg acaataacat agactggtcc tgtggcttcg
601 aggagtaagc taagtagaaa aaagtagaaa aatcagacaa aagttttaat tcccccttga
661 agatcctagc atttaaaaac ccaaagtgga taatttagga atcctttttt taaagtgtat
721 tacctggagc aagctctgaa gccctgggca ggaggagctg cacagcctgc gggccatgca
781 gtgcctgttg atctctaaac acaccaggat gtgcgcaaga tcctgtagtg cccccagtgc
841 acaggtgagc agttgtgtgc ccagcatata aaatttttgg ttcctcagcc tttctgtctg
901 cctgatgtca agggcttcct ggacagtttg gacgttacag ttcgtcaggc cgtgatcagt
961 ggcctgcagt gggactgctc ctttgatatc tgaacctctg ttatgggctt ctctgagaca
1021 agtaaatgtc aggtgcaaga tctggatact aacagtttca gtttgggaaa tccaagaaaa
1081 agaattatca agtttgatag ggaagctctg tagccttgac tccagcaaga agaaaaggtc
1141 aaaaccacgt gtttcccaaa agtccagact acaatgattc agctgacttg aggacaaggc
1201 ctagcatttg gctgagcaga gccctcttcc ttgccctcca acctggtggc ataggcttgg
1261 caaatggaca acttggttgt ccagacaggt tgaggattcg gttatgatcc cctggggagg
1321 tagcagggac ctctgcaact atgcatgatt tctcaaactt caagattcat gtctggatgt
1381 attatgctgt ggatataagt ttagtagggc ggtcatttcc tactctgagt tactggttac
1441 ctagccagtc catgggtgtg acttggtcct taagtcaggt cactatctgc ctcccaccct
1501 gggggcagga ctgaagtata gaagagcatc atggctgtgc aggaggctgt ggtttgaaaa
1561 ctgagcccag agggcacttt cagctgccct caataatgtg aatggattag tgctaggagc
1621 caaggagcag gactggatta tctcatctga ctgtgtgcag aatcctgttg aatgtccctg
1681 ttttctttgg ttgggcagtc agagctctgc tatggtgaac atccagactg tcaccacttt
1741 ctgtctgccg ctcgaaaggg atagtccttt ccactcggtc ccctttggat cttcttgaca
1801 acaggagcag tccttttatt gttagaagtc agagaaagac ctccagaatc tcctgacttt
1861 agggaatggt ataggggaag atgggaagta agagtcacat atcaaaacta ccctccactt
1921 tattccctga gcgagggttt atgaagtata aaggggtggg agccccgagg tgagcgggaa
1981 cggtgctgct ttatttgaaa tgttttctta cctcattctg tgccccagta gggggtccag
2041 cctcatctgt ctggcttggc cctgtgttcc tcctgtcccc tgctccactg cctatctggt
2101 gccccaggtg ctgcttgcca ctccagctgt cacattgaac agtttcaatt cagctcttaa
2161 tgctcctgct tccgaagcct gcccaatttc ttttttcttg gcctctgttt ttttttttct
2221 ttctttttcc cttgtttttg tagaagactc agaggagaat ctttcttatg gctccctctg
2281 ttgagattgg aattggaaga gaacttaatt ttttgtattt aaaatgcagt gtcatgccta
2341 taagcatttc tcctatatag gactgctttg ctagtgtgcc ctcttgctgt gtcttacttc
2401 ataaggagtt gtatcttccc acctccattt caatactgcc ggttaggacc taagtagaag
2461 agcagtaaag gctgattgac acacaggggg atggagttgg tccttgtcca ttctctcacc
2521 cttgctgtgc atgtatcaat ccttatccca gaaggtacta tttagactgt atagactgat
2581 ttagattaca tactttagag gattaaggaa accatagagt ttgggccttg gaactgttac
2641 tgccttgtcc tagagttgtc ctgatcaggc ttggggccta gttacagatt agtcttaaag
2701 aattgcatta acttaaaaaa aatcaaacct tggcaagagc taaaataatt tggagatatc
2761 tttgcccttg acttgtagac gacatctaag aggatgaaga aaggagagtc taagtgagac
2821 tctggcctac ttcctaacaa tgtcttggaa gtgggatgat ggtaaaggag aaaggccaca
2881 gtccaatccc tctgccttca gatagggaac tcaaatcctg aaattactgt tttctttctg
2941 gccttttctc ctggttagag gaggaagcgg aaagtagttt tgagtaatac tttgttcata
3001 ttacccccct tttgttttgt ttctggcccc tctaccaata gggcagtagc ctcctgccct
3061 ggatgggtat aaggtgggct tggtccaaca ggtgcccaga gggtacatac tcctttctgg
3121 ggagagaatg ctccctacca tatagttgac agtggttagg aactctccct ttccctacct
3181 accttccttt taatagcaga attcctattt ttcccttgat tatgtgtatt gatcaccctg
3241 caatcctatt atgtatctga gtgtgtgtgt gtgtgtatgt gtgtgttatg ggggaagggg
3301 ggggttcttt aaaatttctg tggtttgtgg ctttttcttc catacattag ttcccaccat
3361 cgcatgccca gggaccactg cctggcatta tcgcatgctg ggatcatcgg gggagggtag
3421 tgaagctcac cactgtcctt tgttttggag atttttattt ttgcataata ttttgcatcc
3481 tatacagata gctgattaac tgtattcccc tttcccctat ggctgctggt gtaaataaac
3541 tgcatctccc cattggtaaa cagtaataaa attttaaaaa atgaaaaaaa aaaaaaaaaa
3601 aaa
//