LOCUS BC009031 1465 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens vasohibin 1, mRNA (cDNA clone MGC:17043
IMAGE:4156063), complete cds.
ACCESSION BC009031
VERSION BC009031.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1465)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1465)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: d Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254856.
FEATURES Location/Qualifiers
source 1..1465
/db_xref="H-InvDB:HIT000034146"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17043 IMAGE:4156063"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1465
/gene="VASH1"
/db_xref="GeneID:22846"
/db_xref="MIM:609011"
CDS 494..1108
/gene="VASH1"
/codon_start=1
/product="VASH1 protein"
/protein_id="AAH09031.1"
/db_xref="GeneID:22846"
/db_xref="MIM:609011"
/translation="MPGGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEE
PEEEGEEDLRDGGVPFFVNRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGATDLP
KIPIPSVPTFQPSTPVPERLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEM
TKEALPIKCLEAVILGMYPSSPEGEGSGLLWASASCSESEGGVG"
BASE COUNT 330 a 404 c 409 g 322 t
ORIGIN
1 cgcgcagatg tgagcgtgcg agagttgtgt aggggatttt gttccctccg aaactgagac
61 ccagggcgcc cagtgggcac ccgtgccttg actctgtcct ttctgcagcc gctggtccga
121 gctgtctggc ctcagtttcc ctccgacttt tctccgctct gccagccctc actgctgccc
181 gtcattgttc tcgcagttag atgggggtgc tttgtgacgg ctgccaagtt ggggtgtgtt
241 ctctttattc cgtttttcaa acagaacaag gcctccaagg ctgaccccag acaacccacc
301 ccctcggacc ctaattcacc ttattgcact gatttttttt atcaagtcgt attttattgt
361 acaggagcca cgccctgatt tcttaaaggc gccttgcact ctggccatgt gttatctctg
421 cagccggtgt gtgggaggcc tcttgtgagc cagttgtttt cccgcctcca ccacccccct
481 cgaagattta gggatgccag gggggaagaa ggtggctggg ggtggcagca gcggtgccac
541 tccaacgtcc gctgcggcca ccgccccctc tggggtcagg cgtttggaga ccagcgaagg
601 aacctcagcc cagagagatg aggagccaga agaggaaggg gaagaggacc tgcgagacgg
661 aggcgtcccc ttctttgtca accggggtgg gctacctgtg gatgaggcca cctgggaaag
721 gatgtggaaa cacgtggcca agatccaccc cgatggagag aaggtggcgc aacggatccg
781 tggggccaca gacctgccca agatccccat accgagtgtg cctacgttcc agccgtctac
841 acctgtccct gagcgcctgg aagctgtgca gcgctatatc agagagctgc agtacaatca
901 cacagggaca cagttctttg aaattaagaa gagcagacct ctgacagggc tgatggacct
961 ggccaaggaa atgaccaaag aggccctgcc aatcaaatgc ctggaagccg tgatcctggg
1021 aatgtatcct tcctcgcctg aaggggaggg gtccgggctt ctctgggcct cagcttcctg
1081 ctctgaaagt gagggtgggg taggttgaat gggctccagg gctctcccat atgcagtcat
1141 ctgcttggcc ccaagatgga gaagcacccc actaaagtgg aagaaccccc caaaatggag
1201 gagccccgag gtcccagtac cccacatctc agttgctacc ttcccaggct tactgggcag
1261 ctcttttttg agtcacgtgg atacagggac cgttttctga accccaaatc agggcacagt
1321 gtctcacaaa gacagttgta ccatttccaa gaactagaca gtctgggagg cacagttgga
1381 atgcccagat gttggcattt ccagaacatg ttgatttctg gacgagatat taaagcaaaa
1441 ctgccttaaa aaaaaaaaaa aaaaa
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