LOCUS BC009027 1089 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens WD repeat domain 45, mRNA (cDNA clone IMAGE:4156276),
partial cds.
ACCESSION BC009027
VERSION BC009027.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1089)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1089)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: d Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1089
/db_xref="H-InvDB:HIT000087186"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4156276"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1089
/gene="WDR45"
/gene_synonym="JM5"
/gene_synonym="WDRX1"
/db_xref="GeneID:11152"
CDS <1..912
/gene="WDR45"
/gene_synonym="JM5"
/gene_synonym="WDRX1"
/codon_start=1
/product="WDR45 protein"
/protein_id="AAH09027.1"
/db_xref="GeneID:11152"
/translation="GSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRH
DKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKAAHPTPHLHTLGLCDLCPSLEKQLL
VFPGHKCGSLQLVDLASTKPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLI
RLFDTQSKEKLVELRRGTDPATLYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRS
ALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGRNTSKNVNSVIAICVDGTFH
KYVFTPDGNCNREAFDVYLDICDDDDF"
BASE COUNT 246 a 324 c 277 g 242 t
ORIGIN
1 ggtagtagtc ccaagttctc agagatctca gtgctgatct gggacgatgc ccgggagggc
61 aaggactcca aggagaagct ggtgctggag ttcaccttca ccaagccagt gctttctgtg
121 cgcatgcgcc atgacaagat cgtgatcgtg ctgaagaacc gcatctatgt gtactccttc
181 cccgacaatc cccgaaagct gtttgagttt gatacccggg acaaccccaa ggccgcccac
241 cccacccccc atcttcacac cctagggctc tgtgacctct gccccagcct ggagaagcaa
301 ctgctagtgt tcccgggaca caagtgtggg agtctgcaac ttgtggacct ggcgagcaca
361 aagcctggca cctcgtctgc tccattcacg atcaatgcac atcagagtga catagcctgt
421 gtgtctctaa accagccagg cactgtagtg gcctcagcct cccagaaggg tacccttatt
481 cgcctctttg acacacaatc caaggagaaa ctggtggagc tgcgccgagg cactgaccct
541 gccaccctct actgcattaa cttcagccac gactcctcct tcctctgcgc ttccagtgat
601 aagggtactg tccatatctt tgctctcaag gatacccgcc tcaaccgccg ctccgcgctg
661 gctcgcgtgg gcaaggtggg gcctatgatt gggcagtacg tggactctca gtggagcctg
721 gcgagcttca ctgtgcctgc tgagtcagct tgcatctgcg ccttcggtcg caatacttcc
781 aagaacgtca actctgtcat tgccatctgc gtagatggga ccttccacaa atatgtcttc
841 actcctgatg gaaactgcaa cagagaggct ttcgacgtgt accttgacat ctgtgatgat
901 gatgactttt aaggaccctg ggggctgtgc tagggacctg cagtggcaga actgcagagc
961 tgagccttgg cagtggggcg tgcttggaag ccaccagcca gcaagcatta atggggctgg
1021 tgcccacttt ccactcagca gagctatgtc taaataaaga gctcacttcc ccccaaaaaa
1081 aaaaaaaaa
//