LOCUS BC008999 2965 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens family with sequence similarity 175, member B, mRNA
(cDNA clone MGC:17346 IMAGE:2900632), complete cds.
ACCESSION BC008999
VERSION BC008999.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2965)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2965)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: g Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127649.
FEATURES Location/Qualifiers
source 1..2965
/db_xref="H-InvDB:HIT000034133"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17346 IMAGE:2900632"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2965
/gene="FAM175B"
/gene_synonym="ABRO1"
/db_xref="GeneID:23172"
/db_xref="HGNC:HGNC:28975"
/db_xref="MIM:611144"
CDS 8..1255
/gene="FAM175B"
/gene_synonym="ABRO1"
/codon_start=1
/product="family with sequence similarity 175, member B"
/protein_id="AAH08999.2"
/db_xref="GeneID:23172"
/db_xref="HGNC:HGNC:28975"
/db_xref="MIM:611144"
/translation="MAASISGYTFSAVCFHSANSNADHEGFLLGEVRQEETFSISDSQ
ISNTEFLQVIEIHNHQPCSKLFSFYDYASKVNEESLDRILKDRRKKVIGWYRFRRNTQ
QQMSYREQVLHKQLTRILGVPDLVFLLFSFISTANNSTHALEYVLFRPNRRYNQRISL
AIPNLGNTSQQEYKVSSVPNTSQSYAKVIKEHGTDFFDKDGVMKDIRAIYQVYNALQE
KVQAVCADVEKSERVVESCQAEVNKLRRQITQRKNEKEQERRLQQAVLSRQMPSESLD
PAFSPRMPSSGFAAEGRSTLGDAEASDPPPPYSDFHPNNQESTLSHSRMERSVFMPRP
QAVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGEDSDDSDYENLIDPTEPSNSEYS
HSKDSRPMAHPDEDPRNTQTSQI"
BASE COUNT 918 a 588 c 598 g 861 t
ORIGIN
1 ttccatcatg gcggcgtcca tttcgggcta caccttcagt gctgtgtgtt tccacagcgc
61 caacagcaac gcggaccacg aaggattttt actgggagag gtaagacaag aggaaacgtt
121 tagcatcagt gactcacaaa tcagcaacac agaatttctg caagtaattg aaatccataa
181 ccatcagcct tgttcaaaac tttttagttt ttatgactac gcaagcaaag tgaatgagga
241 gagtttggac aggattctta aagatcggag aaagaaagtc attgggtggt acagattccg
301 gcgcaatacg cagcagcaga tgtcctacag agagcaggtt cttcacaagc agctcacccg
361 catcctcggc gtgcccgacc tcgtctttct tctcttcagc ttcatctcca ctgccaacaa
421 ttccactcac gctttagaat atgtgctctt cagaccaaat agaaggtata atcagaggat
481 atcactcgct attcccaatc taggaaatac tagccagcaa gagtacaaag tgtcttcagt
541 gccaaatact tctcagagtt atgccaaagt gattaaagaa catggtactg acttttttga
601 caaggatgga gtgatgaaag acatcagggc gatttatcag gtttataatg cacttcagga
661 gaaagttcag gcagtgtgtg cagatgttga aaagagtgag cgagttgttg aatcttgtca
721 ggcagaagtg aacaaattaa gaagacaaat cactcagagg aaaaatgaaa aggaacaaga
781 aagaagattg cagcaggcag tgttaagcag acagatgccg tctgaaagct tggacccagc
841 gttcagtcct cggatgccgt cctctgggtt tgcagctgaa ggcagaagta cacttggaga
901 tgcagaggcc tcggatcctc ctccccctta ctctgatttt cacccaaaca atcaagaaag
961 tactttgagc cactctcgca tggaaaggag tgtctttatg cctcgacctc aagctgtggg
1021 ctcttccaat tatgcttcca ccagtgccgg actgaagtat cctggaagtg gggctgacct
1081 tcctcctccc caaagagcag ctggagacag tggtgaggat tcagacgaca gtgattatga
1141 aaatttgatt gaccctacag agccttctaa tagtgaatac tcacattcaa aggattctcg
1201 acccatggca catcccgacg aggaccccag gaacactcag acctcccaga tttaactaaa
1261 caaaagaaac tctccaccta gcactgtttt tcttcattgc ttactgagag ggtttttgag
1321 aacttaatct ggggggagaa ctgctttctc agatacctta actcccgaga agagagtcct
1381 tgtgcacaga acttgtggga gcctccatcc gctgctcttt acctttggat acagtgtgca
1441 agtttcatga cagaatcatt aagataatca aattgtccta attctggtgc gattcatgga
1501 tatactggta aatttaggca aagtgaaact tatcagcgta gtttctgttc tttaaaataa
1561 attggaaatt agagactaag cacaattagt ctataaatgt tctataaatc aaaaacttac
1621 ctcttgcact atcatgcctt gaaatttact ttttcaaagg gaaacaagtt tagcagcagc
1681 cttcaaagaa cttctttcta tgatgagcca aattcatctt tgccagaaaa gaaattttga
1741 taattccaag aagcctgatt agaacaaatc agatatacct tctcttgtct gcatgacttt
1801 gtgagataaa agagagggct tccaactttt ttctactagc ttgatatgta ttatcactta
1861 aaatggttgc ctttaaaaaa aaaaagtaga gatactaatt accagtaagt aatcatccaa
1921 ataaatacgt cataaaataa attaattatt ttttctttga tggattacag tgactactgt
1981 gttgcactgg cacatttatg gtctctgttc tggaatcttg gaggacacac agcagtggag
2041 aacagaagga gtgagtttta taatgaacag attccagaca cggtaggttt agctgagttc
2101 atacagagga gatataactc atttagatct tctgacaaat cctagtgtta gttttatctg
2161 tggaggaaag acatttaata ataaactgtt tgggaatctt ggtgaataaa gattcatttt
2221 caagctgaat aaccatactt attttatttt aagttgccat ttggggaata attgcagtat
2281 gtgtagagac tctcttggga tgcacttata tttttattta atgactactt gttttctagt
2341 tttgcccaca acgtctgaaa ccactaagac attcaggagc atgttgagct tctggtttgg
2401 aaacagcaag acccaccatt tatgacaagg acagccatga ggttaatact tggagtttaa
2461 ctgccttccc tttgaactag ttaaaatctg taagaataag gaagttgttg aaggcttaaa
2521 atctgggttc tgaaaaagta gtttcagttt ataggataca catttactca ctgagctcca
2581 gttccaatac taaattagac agtatcatat agacggaaaa tgaaatgcta gaactgccgt
2641 tctttggatc gccactctat gggggtctgt cttttaacta ctctcctggt tatgttggcc
2701 ttacaccact gccatttgat ttaaaacgct gcagacactt tatctgcaaa tgtgttccag
2761 ttgttatcag ctacctacta cgcagcttca gcgccagtgt gaatttattt ttttttaagt
2821 gccattaccg tctcctctgt tcagattttg acattcagga aaatattttt attttgatgc
2881 catactgaaa tctacaatgt atatctgaca aagcagttaa atgtgacaat aaaaaactta
2941 tttaatcatg aaaaaaaaaa aaaaa
//