LOCUS BC008959 1625 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens histocompatibility (minor) 13, mRNA (cDNA clone
MGC:4069 IMAGE:2961249), complete cds.
ACCESSION BC008959
VERSION BC008959.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008959.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 70609888.
FEATURES Location/Qualifiers
source 1..1625
/db_xref="H-InvDB:HIT000034108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4069 IMAGE:2961249"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1625
/gene="HM13"
/gene_synonym="dJ324O17.1"
/gene_synonym="H13"
/gene_synonym="IMP1"
/gene_synonym="IMPAS"
/gene_synonym="MSTP086"
/gene_synonym="PSENL3"
/gene_synonym="PSL3"
/gene_synonym="SPP"
/db_xref="GeneID:81502"
/db_xref="HGNC:HGNC:16435"
/db_xref="MIM:607106"
CDS 114..1247
/gene="HM13"
/gene_synonym="dJ324O17.1"
/gene_synonym="H13"
/gene_synonym="IMP1"
/gene_synonym="IMPAS"
/gene_synonym="MSTP086"
/gene_synonym="PSENL3"
/gene_synonym="PSL3"
/gene_synonym="SPP"
/codon_start=1
/product="histocompatibility (minor) 13"
/protein_id="AAH08959.1"
/db_xref="GeneID:81502"
/db_xref="HGNC:HGNC:16435"
/db_xref="MIM:607106"
/translation="MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMAL
LPIFFGALRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYIN
LLLSMYFFVLGILALSHTISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDT
KDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIY
DVFWVFGTNVMVTVAKFFEAPIKLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALL
LRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVA
LAKGEVTEMFSYEESNPKDPAAVTESKEGTEASASKGLEKKEK"
BASE COUNT 385 a 487 c 402 g 351 t
ORIGIN
1 aacccttcct gttgccttag gggaacgtgg ctttccctgc agagccggtg tctccgcctg
61 cgtccctgct gcagcaaccg gagctggagt cggatcccga acgcaccctc gccatggact
121 cggccctcag cgatccgcat aacggcagtg ccgaggcagg cggccccacc aacagcacta
181 cgcggccgcc ttccacgccc gagggcatcg cgctggccta cggcagcctc ctgctcatgg
241 cgctgctgcc catcttcttc ggcgccctgc gctccgtacg ctgcgcccgc ggcaagaatg
301 cttcagacat gcctgaaaca atcaccagcc gggatgccgc ccgcttcccc atcatcgcca
361 gctgcacact cttggggctc tacctctttt tcaaaatatt ctcccaggag tacatcaacc
421 tcctgctgtc catgtatttc ttcgtgctgg gaatcctggc cctgtcccac accatcagcc
481 ccttcatgaa taagtttttt ccagccagct ttccaaatcg acagtaccag ctgctcttca
541 cacagggttc tggggaaaac aaggaagaga tcatcaatta tgaatttgac accaaggacc
601 tggtgtgcct gggcctgagc agcatcgttg gcgtctggta cctgctgagg aagcactgga
661 ttgccaacaa cctttttggc ctggccttct cccttaatgg agtagagctc ctgcacctca
721 acaatgtcag cactggctgc atcctgctgg gcggactctt catctacgat gtcttctggg
781 tatttggcac caatgtgatg gtgacagtgg ccaagttctt cgaggcacca ataaaattgg
841 tgtttcccca ggatctgctg gagaaaggcc tcgaagcaaa caactttgcc atgctgggac
901 ttggagatgt cgtcattcca gggatcttca ttgccttgct gctgcgcttt gacatcagct
961 tgaagaagaa tacccacacc tacttctaca ccagctttgc agcctacatc ttcggcctgg
1021 gccttaccat cttcatcatg cacatcttca agcatgctca gcctgccctc ctatacctgg
1081 tccccgcctg catcggtttt cctgtcctgg tggcgctggc caagggagaa gtgacagaga
1141 tgttcagtta tgaggagtca aatcctaagg atccagcggc agtgacagaa tccaaagagg
1201 gaacagaggc atcagcatcg aaggggctgg agaagaaaga gaaatgatgc agctggtgcc
1261 cgagcctctc agggccagac cagacagatg ggggctgggc ccacacaggc gtgcaccggt
1321 agagggcaca ggaggccaag ggcagctcca ggacagggca gggggcagca ggatacctcc
1381 agccaggcct ctgtggcctc tgtttccttc tccctttctt ggccctcctc tgctcctccc
1441 cacaccctgc aggcaaaaga aacccccagc ttcccccctc cccgggagcc aggtgggaaa
1501 agtgggtgtg atttttagat tttgtattgt ggactgattt tgcctcacat taaaaactca
1561 tcccatggcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaa
//