LOCUS BC008895 1587 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein M, mRNA (cDNA
clone IMAGE:3678884), partial cds.
ACCESSION BC008895
VERSION BC008895.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1587)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1587)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008895.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1587
/db_xref="H-InvDB:HIT000087167"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3678884"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1587
/gene="HNRPM"
/gene_synonym="HNRNPM"
/gene_synonym="HNRNPM4"
/gene_synonym="HNRPM4"
/gene_synonym="HTGR1"
/gene_synonym="NAGR1"
/db_xref="GeneID:4670"
/db_xref="MIM:160994"
CDS <1..1279
/gene="HNRPM"
/gene_synonym="HNRNPM"
/gene_synonym="HNRNPM4"
/gene_synonym="HNRPM4"
/gene_synonym="HTGR1"
/gene_synonym="NAGR1"
/codon_start=2
/product="HNRPM protein"
/protein_id="AAH08895.2"
/db_xref="GeneID:4670"
/db_xref="MIM:160994"
/translation="MGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGIGFGINKMGGM
EGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIAKQGGGGGGGSVPGIERMGPG
IDRLGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSVERMGSGIERMGPLGLDHM
ASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQTIERMGSGVERMGPAIE
RMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERMGLERMGANSLERMGL
ERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMERGNFGGSFAGSFG
GAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVV
KFESPEVAERACRMMNGMKLSGREIDVRIDRNA"
misc_feature 1049..1261
/gene="HNRPM"
/gene_synonym="HNRNPM"
/gene_synonym="HNRNPM4"
/gene_synonym="HNRPM4"
/gene_synonym="HTGR1"
/gene_synonym="NAGR1"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
BASE COUNT 383 a 335 c 531 g 338 t
ORIGIN
1 catggggtta ggaccaggag ggcaacccat tgatgccaat cacctgaata aaggcatcgg
61 aatgggaaac ataggtcccg caggaatggg aatggaaggc ataggatttg gaataaataa
121 aatgggagga atggaggggc cctttggtgg tggtatggaa aacatgggtc gatttggatc
181 tgggatgaac atgggcagga taaatgaaat cctaagtaat gcactgaaga gaggagagat
241 cattgcaaag cagggaggag gtggaggtgg aggaagcgtc cctgggatcg agaggatggg
301 tcctggcatt gaccgcctcg ggggtgccgg catggagcgc atgggcgcgg gcctgggcca
361 cggcatggat cgcgtgggct ccgagatcga gcgcatgggc ctggtcatgg accgcatggg
421 ctccgtggag cgcatgggct ccggcattga gcgcatgggc ccgctgggcc tcgaccacat
481 ggcctccagc attgagcgca tgggccagac catggagcgc attggctctg gcgtggagcg
541 catgggtgcc ggcatgggct tcggccttga gcgcatggcc gctcccatcg accgtgtggg
601 ccagaccatt gagcgcatgg gctctggcgt ggagcgcatg ggccctgcca tcgagcgcat
661 gggcctgagc atggagcgca tggtgcccgc aggtatggga gctggcctgg agcgcatggg
721 ccccgtgatg gatcgcatgg ccaccggcct ggagcgcatg ggcgccaaca atctggagcg
781 gatgggcctg gagcgcatgg gcgccaacag cctcgagcgc atgggcctgg agcgcatggg
841 tgccaacagc ctcgagcgca tgggccccgc catgggcccg gccctgggcg ctggcattga
901 gcgcatgggc ctggccatgg gtggcggtgg cggtgccagc tttgaccgtg ccatcgagat
961 ggagcgtggc aacttcggag gaagcttcgc aggttccttt ggtggagctg gaggccatgc
1021 tcctggggtg gccaggaagg cctgccagat atttgtgaga aatctgccat tcgatttcac
1081 atggaagatg ctaaaggaca aattcaacga gtgcggccac gtgctgtacg ccgacatcaa
1141 gatggagaat gggaagtcca aggggtgtgg tgtggttaag ttcgagtcgc cagaggtggc
1201 cgagagagcc tgccggatga tgaatggcat gaagctgagt ggccgagaga ttgacgttcg
1261 aattgataga aacgcttaag cagttgcctt ttttaaacat cgatacgaga cctctgaatt
1321 tgtatttttt cttgttaacc attttaattt gttggctgga tgtataaaga tgtttaaaaa
1381 attcagttgc tttttggggt aatttgaatt acttttttaa tgactggggt tccatttgac
1441 tgtttgcatt gagattgcaa tgtgcgcaat tttttttgta gttgtggcat cttgttgaca
1501 tcgaatatga ctttgataat aaataccggt tcctgaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//