LOCUS BC008879 1936 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 5-aminoimidazole-4-carboxamide ribonucleotide
formyltransferase/IMP cyclohydrolase, mRNA (cDNA clone MGC:15334
IMAGE:4300570), complete cds.
ACCESSION BC008879
VERSION BC008879.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1936)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1936)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC008879.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725714.
FEATURES Location/Qualifiers
source 1..1936
/db_xref="H-InvDB:HIT000034046"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15334 IMAGE:4300570"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1936
/gene="ATIC"
/gene_synonym="AICAR"
/gene_synonym="AICARFT"
/gene_synonym="IMPCHASE"
/gene_synonym="PURH"
/db_xref="GeneID:471"
/db_xref="HGNC:HGNC:794"
/db_xref="MIM:601731"
CDS 31..1809
/gene="ATIC"
/gene_synonym="AICAR"
/gene_synonym="AICARFT"
/gene_synonym="IMPCHASE"
/gene_synonym="PURH"
/codon_start=1
/product="5-aminoimidazole-4-carboxamide ribonucleotide
formyltransferase/IMP cyclohydrolase"
/protein_id="AAH08879.1"
/db_xref="GeneID:471"
/db_xref="HGNC:HGNC:794"
/db_xref="MIM:601731"
/translation="MAPGQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDA
GLAVRDVSELTGFPEMLGGRVKTLHPAVHAGILARNIPEDNADMARLDFNLIRVVACN
LYPFVKTVASPGVTVEEAVEQIDIGGVTLLRAAAKNHARVTVVCEPEDYVVVSTEMQS
SESKDTSLETRRQLALKAFTHTAQYDEAISDYFRKQYSKGVSQMPLRYGMNPHQTPAQ
LYTLQPKLPITVLNGAPGFINLCDALNAWQLVKELKEALGIPAAASFKHVSPAGAAVG
IPLSEDEAKVCMVYDLYKTLTPISAAYARARGADRMSSFGDFVALSDVCDVPTAKIIS
REVSDGIIAPGYEEEALTILSKKKNGNYCVLQMDQSYKPDENEVRTLFGLHLSQKRNN
GVVDKSLFSNVVTKNKDLPESALRDLIVATIAVKYTQSNSVCYAKNGQVIGIGAGQQS
RIHCTRLAGDKANYWWLRHHPQVLSMKFKTGVKRAEISNAIDQYVTGTIGEDEDLIKW
KALFEEVPELLTEAEKKEWVEKLTEVSISSDAFFPFRDNVDRAKRSGVAYIAAPSGSA
ADKVVIEACDELGIILAHTNLRLFHH"
BASE COUNT 550 a 428 c 463 g 495 t
ORIGIN
1 ccgctcgccc tgaacccagt gcctgcagcc atggctcccg gccagctcgc cttatttagt
61 gtctctgaca aaaccggcct tgtggaattt gcaagaaacc tgaccgctct tggtttgaat
121 ctggtcgctt ccggagggac tgcaaaagct ctcagggatg ctggtctggc agtcagagat
181 gtctctgagt tgacgggatt tcctgaaatg ttggggggac gtgtgaaaac tttgcatcct
241 gcagtccatg ctggaatcct agctcgtaat attccagaag ataatgctga catggccaga
301 cttgatttca atcttataag agttgttgcc tgcaatctct atccctttgt aaagacagtg
361 gcttctccag gtgtaactgt tgaggaggct gtggagcaaa ttgacattgg tggagtaacc
421 ttactgagag ctgcagccaa aaaccacgct cgagtgacag tggtgtgtga accagaggac
481 tatgtggtgg tgtccacgga gatgcagagc tccgagagta aggacacctc cttggagact
541 agacgccagt tagccttgaa ggcattcact catacggcac aatatgatga agcaatttca
601 gattatttca ggaaacagta cagcaaaggc gtatctcaga tgcccttgag atatggaatg
661 aacccacatc agacccctgc ccagctgtac acactgcagc ccaagcttcc catcacagtt
721 ctaaatggag cccctggatt tataaacttg tgcgatgctt tgaacgcctg gcagctggtg
781 aaggaactca aggaggcttt aggtattcca gccgctgcct ctttcaaaca tgtcagccca
841 gcaggtgctg ctgttggaat tccactcagt gaagatgagg ccaaagtctg catggtttat
901 gatctctata aaaccctcac acccatctca gcggcatatg caagagcaag aggggctgat
961 aggatgtctt catttggtga ttttgttgca ttgtccgatg tttgtgatgt accaactgca
1021 aaaattattt ccagagaagt atctgatggt ataattgccc caggatatga agaagaagcc
1081 ttgacaatac tttccaaaaa gaaaaatgga aactattgtg tccttcagat ggaccaatct
1141 tacaaaccag atgaaaatga agttcgaact ctctttggtc ttcatttaag ccagaagaga
1201 aataatggtg tcgtcgacaa gtcattattt agcaatgttg ttaccaaaaa taaagatttg
1261 ccagagtctg ccctccgaga cctcatcgta gccaccattg ctgtcaagta cactcagtct
1321 aactctgtgt gctacgccaa gaacgggcag gttatcggca ttggagcagg acagcagtct
1381 cgtatacact gcactcgcct tgcaggagat aaggcaaact attggtggct tagacaccat
1441 ccacaagtgc tttcgatgaa gtttaaaaca ggagtgaaga gagcagaaat ctccaatgcc
1501 atcgatcaat atgtgactgg aaccattggc gaggatgaag atttgataaa gtggaaggca
1561 ctgtttgagg aagtccctga gttactcact gaggcagaga agaaggaatg ggttgagaaa
1621 ctgactgaag tttctatcag ctctgatgcc ttcttccctt tccgagataa cgtagacaga
1681 gctaaaagga gtggtgtggc gtacattgcg gctccctccg gttctgctgc tgacaaagtt
1741 gtgattgagg cctgcgacga actgggaatc atcctcgctc atacgaacct tcggctcttc
1801 caccactgat tttaccacac actgtttttt ggcttgctta tgtgtaggtg aacagtcacg
1861 cctgaaactt tgaggataac tttttaaaaa aataaaacag tatctcttaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaa
//