LOCUS BC008861 1665 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 38kDa, V0 subunit
d1, mRNA (cDNA clone MGC:15351 IMAGE:4126712), complete cds.
ACCESSION BC008861
VERSION BC008861.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1665)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1665)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC008861.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: g Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335257.
FEATURES Location/Qualifiers
source 1..1665
/db_xref="H-InvDB:HIT000034029"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15351 IMAGE:4126712"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1665
/gene="ATP6V0D1"
/gene_synonym="ATP6DV"
/gene_synonym="P39"
/gene_synonym="VATX"
/gene_synonym="VMA6"
/gene_synonym="VPATPD"
/db_xref="GeneID:9114"
/db_xref="HGNC:HGNC:13724"
/db_xref="MIM:607028"
CDS 79..1134
/gene="ATP6V0D1"
/gene_synonym="ATP6DV"
/gene_synonym="P39"
/gene_synonym="VATX"
/gene_synonym="VMA6"
/gene_synonym="VPATPD"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 38kDa, V0
subunit d1"
/protein_id="AAH08861.1"
/db_xref="GeneID:9114"
/db_xref="HGNC:HGNC:13724"
/db_xref="MIM:607028"
/translation="MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLED
LKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITY
SYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPL
AAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADR
RAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKL
LFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAE
CIAQRHRAKIDNYIPIF"
BASE COUNT 350 a 495 c 449 g 371 t
ORIGIN
1 cagcgtcagc tgacctgggg agtcgcgatt cgtgccggcc ggtcctggtt ctccggtccc
61 gccgctcccg cagcagccat gtcgttcttc ccggagcttt actttaacgt ggacaatggc
121 tacttggagg gactggtgcg cggcctgaag gccggggtgc tcagccaggc cgactacctc
181 aacctggtgc agtgcgagac gctagaggac ttgaaactgc atctgcagag cactgattat
241 ggtaacttcc tggccaacga ggcatcacct ctgacggtgt cagtcatcga tgaccggctc
301 aaggagaaga tggtggtgga gttccgccac atgaggaacc atgcctatga gccactcgcc
361 agcttcctag acttcattac ttacagttac atgatcgaca acgtgatcct gctcatcaca
421 ggcacgctgc accagcgctc catcgctgag ctcgtgccca agtgccaccc actaggcagc
481 ttcgagcaga tggaggccgt gaacattgct cagacacctg ctgagctcta caatgccatt
541 ctggtggaca cgcctcttgc ggcttttttc caggactgca tttcagagca ggaccttgac
601 gagatgaaca tcgagatcat ccgcaacacc ctctacaagg cctacctgga gtccttctac
661 aagttctgca ccctactggg cgggactacg gctgatgcca tgtgccccat cctggagttt
721 gaagcagacc gccgcgcctt catcatcacc atcaattctt tcggcacaga gctgtccaaa
781 gaggaccgtg ccaagctctt tccacactgt gggcggctct accctgaggg cctggcgcag
841 ctggctcggg ctgacgacta tgaacaggtc aagaacgtgg ccgattacta cccggagtac
901 aagctgctct tcgagggtgc aggtagcaac cctggagaca agacgctgga ggaccgattc
961 tttgagcacg aggtaaagct gaacaagttg gccttcctga accagttcca ctttggtgtc
1021 ttctatgcct tcgtgaagct caaggagcag gagtgtcgca acatcgtgtg gatcgctgaa
1081 tgtatcgccc agcgccaccg cgccaaaatc gacaactaca tccctatctt ctagcgtcct
1141 ggcccaaggc tctcaattgc actctttgtg tgtgtgtgtg tgtgtgtgcg cgtgtgtgtg
1201 cgtgtgtgtg tatgtggtct gtgacaagcc tgtggctcac ctgcctgtcc ggggtgtagt
1261 acgctgtcct agcggctgcc cagttctcct gaccctctta gagactgttc ttaggcctga
1321 aaaggggctg ggcacccccc cccaccaagg atggacgaag accccctcca gagcaaggag
1381 gccccctcag ccctgtggtt acagccgctg atgtatctaa gaagcatgtc actttcatgt
1441 tcctccctaa ctccctgacc tgagaaccct ggggcctggg ggcagtttga gcctcctctc
1501 ccttctgtgg gtcgctccca gagccatggc ccatgggaag gacagagtgt gtgtgtcctt
1561 ggggcctggg gggatgttgc tcctcagctc cctccctcag ccctgcccct ctgagacaat
1621 aaaactgccc tctctaaggc aaaaaaaaaa aaaaaaaaaa aaaaa
//