LOCUS BC008849 1748 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens polymerase I and transcript release factor, mRNA (cDNA
clone MGC:14316 IMAGE:4140111), complete cds.
ACCESSION BC008849
VERSION BC008849.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1748)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: j Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1748
/db_xref="H-InvDB:HIT000034020"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14316 IMAGE:4140111"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1748
/gene="PTRF"
/gene_synonym="FKSG13"
/db_xref="GeneID:284119"
/db_xref="MIM:603198"
CDS 83..679
/gene="PTRF"
/gene_synonym="FKSG13"
/codon_start=1
/product="PTRF protein"
/protein_id="AAH08849.1"
/db_xref="GeneID:284119"
/db_xref="MIM:603198"
/translation="MEDAAALELSSDEAVEVEEVIEESRAERIKRSGLRRVDDFKKAF
SKEKMEKTKVRTRENLEKTRLKTKENLEKTRHTLEKRMNKLGTRLVPAERREKLKTSR
DKLRKSFTPDHVVYARSKTAVYKVPPFTFHVKKIREGQVEVLKATEMVEVGADDDEGG
AERGEAGDLRRGSSPDVHALLEITEESDAVLVDKSDSD"
BASE COUNT 407 a 508 c 545 g 288 t
ORIGIN
1 ggcacgaggc tcctgcttct ctccgggtct cccgctccag ctccagcccc acccggccgg
61 tcccgcacgg ctccgggtag ccatggagga cgcagcggcg ctggagcttt cgtcggacga
121 ggcggtggag gttgaggagg ttattgagga gtcccgcgca gagcgtatca agcgcagcgg
181 cctgcggcgc gtggacgact tcaagaaggc cttctccaag gagaagatgg agaagaccaa
241 ggtgcgtacc cgcgagaacc tggagaagac gcgcctcaag accaaggaaa acctggagaa
301 gacgcggcac accctggaga agcgcatgaa caagctgggc acgcgcctgg tgcccgccga
361 gcggcgcgag aaactgaaga cgtcgcggga caagttgcgc aaatccttca cgcccgacca
421 cgtggtgtac gcgcgctcca agaccgcggt ctacaaggtg ccacccttca ccttccacgt
481 caagaagatc cgcgagggcc aggtggaagt gctcaaggcc accgagatgg tggaggtggg
541 cgccgacgac gacgagggcg gcgcggagcg cggggaggcc ggcgacctgc ggcgcgggag
601 cagccccgac gtgcacgcgc tgctggagat caccgaggag tcggacgccg tgctggtgga
661 caagagcgac agcgactgag ccgcccccgc tgccacccac cccattcctc gctccttccg
721 aacttcctct ttcgcattct ctctcggctc gagctggctg agatttttct aaattgaaaa
781 cacgcccccc tccccacacc tccaggaact ccactcccag tcttagagct gttaggaccc
841 gatggggagg cagcccccgc agtggacaac ccccgcttgg acacagtccg agtggaatgg
901 gaagggaatg gtcaatccct gtcctggttg tccaagtcgg gatctcagag gaaattgcag
961 tgattccacg gttaggcccc cctggggggg ctgccttccc ctcagcctct ccccacacca
1021 cccacccagc tgctgtcatt ccgctcactg agctcttctt cattctcacc ctgatccctg
1081 ggggactcaa agccaaaact gcccaaagag gaaagattga atcctaaagg ggatccctgc
1141 ccccatggga ggccccctac tagaaggacg tgaaagcagc ttttggggga aactgaggca
1201 gtggggaaga cagagcagaa tgagccctca ccctggctgg gggtccagca caggctgtat
1261 ctgcagaggg tcccagagga acgctggagc caagagaagc cctgggaagg aggggtgggg
1321 aacgacatgc atgtgaggga tggcacactg atgtgtttat gcacctgtac acaggagcgc
1381 atggccatgg ctttggaaag gagaatggaa aaatagaaga aggtcggccg ggcttggtgg
1441 cttatgcctg taaccccagt actttgggag gccgaggtgg gcggatcacc tgaagtcagg
1501 agttcgggac cagcctggca aacaccccat ctctactaag cgaaaaccca tctctactaa
1561 aattacaaaa attagctggg catggttgcg catgcctgta atcccagcta ctttggaggc
1621 tgaggtgggg agaattgctt gaacctggga ggtggaggtt gcagtgagcc aaggtcgcga
1681 cactgcactc cagcctgggt gacagagtga gactccatct caacagaagg aaaaaaaaaa
1741 aaaaaaaa
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