LOCUS BC008825 3401 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 16, mRNA (cDNA
clone MGC:12779 IMAGE:4100320), complete cds.
ACCESSION BC008825
VERSION BC008825.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3401)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3401)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008825.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: b Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21237727.
FEATURES Location/Qualifiers
source 1..3401
/db_xref="H-InvDB:HIT000033999_10"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12779 IMAGE:4100320"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3401
/gene="DHX16"
/gene_synonym="DBP2"
/gene_synonym="PRO2014"
/gene_synonym="PRP8"
/db_xref="GeneID:8449"
/db_xref="HGNC:HGNC:2739"
/db_xref="MIM:603405"
CDS 164..3292
/gene="DHX16"
/gene_synonym="DBP2"
/gene_synonym="PRO2014"
/gene_synonym="PRP8"
/codon_start=1
/product="DEAH (Asp-Glu-Ala-His) box polypeptide 16"
/protein_id="AAH08825.1"
/db_xref="GeneID:8449"
/db_xref="HGNC:HGNC:2739"
/db_xref="MIM:603405"
/translation="MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFV
QRLRDTDTLDLSGPARDFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYRLLED
SEESSEETVSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPES
EDEWERTERERLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEED
RKAMVPELRKKSRREYLAKREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRV
RDLAREYRAAGEQEKLEATNRYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARL
GAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESI
QAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIAC
TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE
PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD
APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAA
CEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLT
IEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTA
WAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYA
LGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR
PKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDV
REQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGYRTVKQQQTVFIHP
NSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMP
KKKIGKTREELG"
BASE COUNT 829 a 878 c 1035 g 659 t
ORIGIN
1 ggtacgggaa gacagctttg ggatgtcgga agatcctaga ggtcccaagg tagctgactt
61 gcgaagctga ggctccagcc gagggctcca ggcctctgac cggcccagca gtgagcgcgg
121 ctgcccgacg cttcagggcc gggagcaggg agcgtgagtc gccatggcga cgccggcggg
181 tctggagcgc tgggttcagg acgagctgca ctcggtgttg gggctgagcg agcggcacgt
241 cgcccagttt ctgatcggta ccgcacagcg ctgcacctct gccgaggagt tcgtgcagcg
301 cctacgagac actgatacct tggatctcag tgggccggcc cgggacttcg ccctgagact
361 ctggaacaag gtaccacgaa aggcagtggt agaaaagcca gctcgggcag cagagcgaga
421 ggcccgggcc ctgctggaga agaaccgatc ttataggtta ctggaagaca gtgaagagag
481 cagtgaggag actgtgagta gggctggaag cagcctccag aagaaacgta aaaagcggaa
541 acacctcagg aagaagcgtg aggaagaaga ggaggaagag gcttctgaga aagggaagaa
601 gaaaacaggg gggagtaaac agcagacaga gaagccagag tcggaagatg agtgggaacg
661 gacagagcgt gaacgccttc aggacctgga ggagcgtgat gcctttgctg agcgggttcg
721 acagcgggac aaggatcgga ctcgaaatgt cctggaacgg tcagacaaga aggcttatga
781 agaggctcag aagcgcctca agatggccga ggaagaccgg aaggccatgg tccctgagct
841 gcggaagaaa tctcgccgag agtacctggc taagcgggag cgagagaagc ttgaggacct
901 ggaggcggag ctggctgatg aggagttcct ttttggggac gtggagctga gccggcacga
961 gcggcaggag ctcaaatata agcggcgagt gcgggatctc gcccgggagt accgggcagc
1021 tggggagcag gagaagctgg aggccaccaa tcgctaccac atgcccaagg aaacccgagg
1081 acagccagcc cgagctgtgg atctagtgga ggaggaatca ggagcccctg gggaggagca
1141 gcggcgctgg gaggaggcgc ggcttggggc agcgtccctg aagtttgggg cccgagatgc
1201 tgcctctcag gagcccaagt atcaactggt gctggaggag gaggagacca ttgagtttgt
1261 ccgggccact cagctccagg gtgatgagga gccgtcagct ccacccactt caactcaggc
1321 ccagcagaaa gagtccatcc aggccgtccg ccgcagcctc ccggtgttcc catttcgaga
1381 ggagctcctg gctgctattg caaatcacca agtcctcatc attgaaggcg agacaggctc
1441 agggaagacc acccagatcc cgcagtatct ctttgaggag ggttatacaa acaagggtat
1501 gaagattgcc tgcacccaac cccggagagt ggctgccatg agtgtggccg cccgagtggc
1561 ccgggagatg ggtgtgaagc ttgggaatga ggttggctac agcatccgct ttgaggactg
1621 cacatcagag cgaactgtcc tccgctacat gacagatggg atgcttctcc gggagttcct
1681 ctctgagcct gacctggcga gttacagcgt ggtgatggtg gatgaggcac acgaaaggac
1741 cctacacaca gacattctct ttggattgat caaggatgtt gctcgcttcc gacctgagct
1801 caaggtcctg gtggcttcag ccacaatgga cactgcccgt ttttccacct tctttgatga
1861 cgcccctgtg tttcgaatcc ccggacgcag gtttcctgtg gacatcttct acaccaaggc
1921 tccagaggct gactacttgg aagcttgtgt agtatctgtg ttgcagatcc atgtgaccca
1981 gccccctggg gatatcctgg tgttcctgac aggacaggag gagattgagg ctgcctgtga
2041 gatgctccag gatcgctgcc gccgcctggg ctccaaaatc cgggagctcc tggtgctgcc
2101 catttatgcc aatctgccct ctgacatgca ggcccgtatc ttccagccca caccacctgg
2161 ggcacgaaag gtggttgtgg caacgaacat tgctgagaca tcactcacca ttgagggcat
2221 catttatgtg ctggatccag ggttctgtaa gcagaagagc tacaaccccc gcacaggcat
2281 ggaatcgctc actgtcacac cctgcagcaa ggcctcagcc aatcagcgag ctggcagggc
2341 aggtcgggtg gctgcaggga agtgcttccg cctgtatacc gcctgggcct atcagcacga
2401 gcttgaggaa accacagtgc ctgagatcca gaggaccagc ttgggcaatg tcgtgttgct
2461 gctcaagagc ttagggatcc atgacctaat gcactttgat ttcctggacc ctccaccata
2521 tgagacactg ctgctggctt tggagcagct gtatgctctg ggagccctca accaccttgg
2581 ggagctcacc acgtctggtc gaaagatggc agagctgccg gtggacccca tgctgtccaa
2641 aatgatctta gcctctgaga agtacagctg ttcagaggag atcctgacag tggctgccat
2701 gctctctgtc aacaactcca tcttctaccg accaaaggac aaggtcgtcc atgctgacaa
2761 tgcccgtgtc aacttctttc tccctggcgg tgaccacctg gttctgctaa atgtttacac
2821 acagtgggct gagagtggtt actcttccca gtggtgctat gagaactttg tacagttcag
2881 atcgatgcgc cgagcccggg atgtgcggga acagctggaa gggctcttgg aacgtgtgga
2941 agttggtctc agttcctgcc agggggacta tatccgtgta cgcaaggcca tcactgctgg
3001 ttacttttac cacacggcac ggttgactcg gagtggctac cgcacagtga aacagcagca
3061 gacagtcttc attcatccca actcctccct ctttgagcaa cagccacgct ggctgctcta
3121 ccacgaactt gtcttgacca ccaaagagtt catgagacag gtactggaga ttgagagcag
3181 ttggcttctg gaggtggctc cccattatta taaggccaag gagctagaag atccccatgc
3241 taagaaaatg cccaaaaaaa aaataggcaa aacacgagaa gagctagggt aagagaagga
3301 cgtaaacaga acctgacacc agctcctttt ccttctatac attatttaat acctattaaa
3361 taaaattatt tttggaaaaa aaaaaaaaaa aaaaaaaaaa a
//