LOCUS BC008807 2303 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens keratin 6A, mRNA (cDNA clone MGC:10443 IMAGE:3947610),
complete cds.
ACCESSION BC008807
VERSION BC008807.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2303)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2303)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC008807.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17505187.
FEATURES Location/Qualifiers
source 1..2303
/db_xref="H-InvDB:HIT000033986"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10443 IMAGE:3947610"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2303
/gene="KRT6A"
/gene_synonym="CK6A"
/gene_synonym="CK6C"
/gene_synonym="K6A"
/gene_synonym="K6C"
/db_xref="GeneID:3853"
/db_xref="HGNC:HGNC:6443"
/db_xref="MIM:148041"
CDS 49..1743
/gene="KRT6A"
/gene_synonym="CK6A"
/gene_synonym="CK6C"
/gene_synonym="K6A"
/gene_synonym="K6C"
/codon_start=1
/product="keratin 6A"
/protein_id="AAH08807.1"
/db_xref="GeneID:3853"
/db_xref="HGNC:HGNC:6443"
/db_xref="MIM:148041"
/translation="MASTSTTIRSHSSSRRGFSANSARLPGVSRSGFSSVSVSRSRGS
GGLGGACGGAGFGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGAGSGFGF
GGGAGIGFGLGGGAGLAGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVR
AEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWTLLQEQGTKTVRQNLEPLFEQYI
NNLRRQLDSIVGERGRLDSELRGMQDLVEDFKNKYEDEINKRTAAENEFVTLKKDVDA
AYMNKVELQAKADTLTDEINFLRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSII
AEVKAQYEEIAQRSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR
SEIDHVKKQCANLQAAIADAEQRGEMALKDAKNKLEGLEDALQKAKQDLARLLKEYQE
LMNVKLALDVEIATYRKLLEGEECRLNGEGVGQVNISVVQSTVSSGYGGASGVGSGLG
LGGGSSYSYGSGLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTSSSSRKSYKH"
BASE COUNT 534 a 628 c 650 g 491 t
ORIGIN
1 ctcctccagc ctctcacact ctcctcagct ctctcatctc ctggaaccat ggccagcaca
61 tccaccacca tcaggagcca cagcagcagc cgccggggtt tcagtgccaa ctcagccagg
121 ctccctgggg tcagccgctc tggcttcagc agcgtctccg tgtcccgctc caggggcagt
181 ggtggcctgg gtggtgcatg tggaggagct ggctttggca gccgcagtct gtatggcctg
241 gggggctcca agaggatctc cattggaggg ggcagctgtg ccatcagtgg cggctatggc
301 agcagagccg gaggcagcta tggctttggt ggcgccggga gtggatttgg tttcggtggt
361 ggagccggca ttggctttgg tctgggtggt ggagccggcc ttgctggtgg ctttgggggc
421 cctggcttcc ctgtgtgccc ccctggaggc atccaagagg tcaccgtcaa ccagagtctc
481 ctgactcccc tcaacctgca aatcgatccc accatccagc gggtgcgggc tgaggagcgt
541 gaacagatca agaccctcaa caacaagttt gcctccttca tcgacaaggt gcggttcctg
601 gagcagcaga acaaggttct ggaaacaaag tggaccctgc tgcaggagca gggcaccaag
661 actgtgaggc agaacctgga gccgttgttc gagcagtaca tcaacaacct caggaggcag
721 ctggacagca ttgtcgggga acggggccgc ctggactcag agctcagagg catgcaggac
781 ctggtggagg acttcaagaa caaatatgag gatgaaatca acaagcgcac agcagcagag
841 aatgaatttg tgactctgaa gaaggatgtg gatgctgcct acatgaacaa ggttgaactg
901 caagccaagg cagacactct cacagacgag atcaacttcc tgagagcctt gtatgatgca
961 gagctgtccc agatgcagac ccacatctca gacacatctg tggtgctgtc catggacaac
1021 aaccgcaacc tggacctgga cagcatcatc gctgaggtca aggcccaata tgaggagatt
1081 gctcagagaa gccgggctga ggctgagtcc tggtaccaga ccaagtacga ggagctgcag
1141 gtcacagcag gcagacatgg ggacgacctg cgcaacacca agcaggagat tgctgagatc
1201 aaccgcatga tccagaggct gagatctgag atcgaccacg tcaagaagca gtgcgccaac
1261 ctgcaggccg ccattgctga tgctgagcag cgtggggaga tggccctcaa ggatgccaag
1321 aacaagctgg aagggctgga ggatgccctg cagaaggcca agcaggacct ggcccggctg
1381 ctgaaggagt accaggagct gatgaatgtc aagctggccc tggacgtgga gatcgccacc
1441 taccgcaagc tgctggaggg tgaggagtgc aggctgaatg gcgaaggcgt tggacaagtc
1501 aacatctctg tggtgcagtc caccgtctcc agtggctatg gcggtgccag tggtgtcggc
1561 agtggcttag gcctgggtgg aggaagcagc tactcctatg gcagtggtct tggcgttgga
1621 ggtggcttca gttccagcag tggcagagcc attgggggtg gcctcagctc tgttggaggc
1681 ggcagttcca ccatcaagta caccaccacc tcctcctcca gcaggaagag ctataagcac
1741 taaagtgcgt ctgctagctc tcggtcccac agtcctcagg cccctctctg gctgcagagc
1801 cctctcctca ggttgccttt cctctcctgg cctccagtct cccctgctgt cccaggtaga
1861 gctgggtatg gatgcttagt gccctcactt cttctctctc tctctatacc atctgagcac
1921 ccattgctca ccatcagatc aacctctgat tttacatcat gatgtaatca ccactggagc
1981 ttcactgtta ctaaattatt aatttcttgc ctccagtgtt ctatctctga ggctgagcat
2041 tataagaaaa tgacctctgc tccttttcat tgcagaaaat tgccaggggc ttatttcaga
2101 acaacttcca cttactttcc actggctctc aaactctcta acttataagt gttgtgaacc
2161 cccacccagg cagtatccat gaaagcacaa gtgactagtc ctatgatgta caaagcctgt
2221 atctctgtga tgatttctgt gctcttcgct gtttgcaatt gctaaataaa gcagatttat
2281 aatacaaaaa aaaaaaaaaa aaa
//