LOCUS BC008800 3460 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polymerase (DNA directed), delta 1, catalytic subunit
125kDa, mRNA (cDNA clone MGC:3951 IMAGE:3634655), complete cds.
ACCESSION BC008800
VERSION BC008800.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: j Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505932.
FEATURES Location/Qualifiers
source 1..3460
/db_xref="H-InvDB:HIT000033980"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3951 IMAGE:3634655"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3460
/gene="POLD1"
/db_xref="GeneID:5424"
/db_xref="HGNC:HGNC:9175"
/db_xref="MIM:174761"
CDS 45..3368
/gene="POLD1"
/codon_start=1
/product="polymerase (DNA directed), delta 1, catalytic
subunit 125kDa"
/protein_id="AAH08800.1"
/db_xref="GeneID:5424"
/db_xref="HGNC:HGNC:9175"
/db_xref="MIM:174761"
/translation="MDGKRRPGPGPGVPPKRARGGLWDDDDAPRPSQFEEDLALMEEM
EAEHRLQEQEEEELQSVLEGVADGQVPPSAIDPRWLRPTPPALDPQTEPLIFQQLEID
HYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEH
MGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPR
LVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALR
LKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPV
IQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEEDLLQAWSTFIRIMDPDV
ITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRRDTKVVS
MVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRL
AVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHE
GLLMPVVKSEGGEDYTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRP
GTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLR
RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYT
VENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVY
FPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRD
PEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVELAERMRKRDPGS
APSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEP
ILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQGAVCEFCQ
PRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKD
LEDQEQLLRRFGPPGPEAW"
BASE COUNT 645 a 1109 c 1115 g 591 t
ORIGIN
1 cggcggcgta ggctgtggcg ggaaacgctg tttgaagcgg caggatggat ggcaagcggc
61 ggccaggccc agggcccggg gtgcccccaa agcgggcccg tgggggcctc tgggatgatg
121 atgatgcacc tcggccatcc caattcgagg aggacctggc actgatggag gagatggagg
181 cagaacacag gctgcaggag caggaggagg aggagctgca gtcagtcctg gagggggttg
241 cagacgggca ggtcccacca tcagccatag atcctcgctg gcttcggccc acaccaccag
301 cgctggaccc ccagacagag cccctcatct tccaacagtt ggagattgac cattatgtgg
361 gcccagcaca gcctgtgcct ggggggcccc caccatccca cggctccgtg cctgtgctcc
421 gcgccttcgg ggtcaccgat gaggggttct ctgtctgctg ccacatccac ggcttcgctc
481 cctacttcta caccccagcg ccccctggtt tcgggcccga gcacatgggt gacctgcaac
541 gggagctgaa cttggccatc agccgggaca gtcgcggggg gagggagctg actgggccgg
601 ccgtgctggc tgtggaactg tgctcccgag agagcatgtt tgggtaccac gggcacggcc
661 cctccccgtt cctgcgcatc accgtggcgc tgccgcgcct cgtggccccg gcccgccgtc
721 tcctggaaca gggcatccgt gtggcaggcc tgggcacgcc cagcttcgcg ccctacgagg
781 ccaacgtcga ctttgagatc cggttcatgg tggacacgga catcgtcggc tgcaactggc
841 tggagctccc agctgggaaa tacgccctga ggctgaagga gaaggctacg cagtgccagc
901 tggaggcgga cgtgctgtgg tctgacgtgg tcagtcaccc accggaaggg ccatggcagc
961 gcattgcgcc cttgcgcgtg ctcagcttcg atatcgagtg cgccggccgc aaaggcatct
1021 tccctgagcc tgagcgggac cctgtcatcc agatctgctc gctgggcctg cgctgggggg
1081 agccggagcc cttcctacgc ctggcgctca ccctgcggcc ctgtgccccc atcctgggtg
1141 ccaaggtgca gagctacgag aaggaggagg acctgctgca ggcctggtcc accttcatcc
1201 gtatcatgga ccccgacgtg atcaccggtt acaacatcca gaacttcgac cttccgtacc
1261 tcatctctcg ggcccagacc ctcaaggtac aaacattccc tttcctgggc cgtgtggccg
1321 gcctttgctc caacatccgg gactcttcat tccagtccaa gcagacgggc cggcgggaca
1381 ccaaggttgt cagcatggtg ggccgcgtgc agatggacat gctgcaggtg ctgctgcggg
1441 agtacaagct ccgctcctac acgctcaatg ccgtgagctt ccacttcctg ggcgagcaga
1501 aggaggacgt gcagcacagc atcatcaccg acctgcagaa tgggaacgac cagacccgcc
1561 gccgcctggc tgtgtactgc ctgaaggatg cctacctgcc actgcggctg ctggagcggc
1621 tcatggtgct ggtgaacgcc gtggagatgg cgagggtcac tggcgtgccc ctcagctacc
1681 tgctcagtcg tggccagcag gtcaaggtcg tatcccagct gttgcggcag gccatgcacg
1741 aggggctgct gatgcccgtg gtgaagtcag agggcggcga ggactacacg ggagccactg
1801 tcatcgagcc cctcaaaggg tactacgacg tccccatcgc caccctggac ttctcctcgc
1861 tgtacccgtc catcatgatg gcccacaacc tgtgttacac cacgctcctt cggcccggga
1921 ctgcacagaa actgggcctg actgaggatc agttcatcag gacccccacc ggggacgagt
1981 ttgtgaagac ctcagtgcgg aaggggctgc tgccccagat cctggagaac ctgctcagtg
2041 cccggaagag ggccaaggcc gagctggcca aggagacaga ccccctccgg cgccaggtcc
2101 tggatggacg gcagctggcg ctgaaggtga gcgccaactc cgtatacggc ttcactggcg
2161 cccaggtggg caagttgccg tgcctggaga tctcacagag cgtcacgggg ttcggacgtc
2221 agatgatcga gaaaaccaag cagctggtgg agtctaagta cacagtggag aatggctaca
2281 gcaccagtgc caaggtggtg tatggtgaca ctgactccgt catgtgccga ttcggcgtgt
2341 cctcggtggc tgaggcgatg gccctggggc gggaggccgc ggactgggtg tcaggtcact
2401 tcccgtcgcc catccggctg gagtttgaga aggtctactt cccatacctg cttatcagca
2461 agaagcgcta cgcgggcctg ctcttctcct cccggcccga cgcccacgac cgcatggact
2521 gcaagggcct ggaggccgtg cgcagggaca actgccccct cgtggccaac ctggtcactg
2581 cctcactgcg ccgcctgctc atcgaccgag accctgaggg cgcggtggct cacgcacagg
2641 acgtcatctc ggacctgctg tgcaaccgca tcgatatctc ccagctggtc atcaccaagg
2701 agctgacccg cgcggcctcc gactatgccg gcaagcaggc ccacgtggag ctggccgaga
2761 ggatgaggaa gcgggacccc gggagtgcgc ccagcctggg cgaccgcgtc ccctacgtga
2821 tcatcagtgc cgccaagggt gtggccgcct acatgaagtc ggaggacccg ctgttcgtgc
2881 tggagcacag cctgcccatt gacacgcagt actacctgga gcagcagctg gccaagcccc
2941 tcctgcgcat cttcgagccc atcctgggcg agggccgtgc cgaggctgtg ctactgcggg
3001 gggaccacac gcgctgcaag acggtgctca cgggcaaggt gggcggcctc ctggccttcg
3061 ccaaacgccg caactgctgc attggctgcc gcacagtgct cagccaccag ggagccgtgt
3121 gtgagttctg ccagccccgg gagtctgagc tgtatcagaa ggaggtatcc catctgaatg
3181 ccctggagga gcgcttctcg cgcctctgga cgcagtgcca gcgctgccag ggcagcctgc
3241 acgaggacgt catctgcacc agccgggact gccccatctt ctacatgcgc aagaaggtgc
3301 ggaaggacct ggaagaccag gagcagctcc tgcggcgctt cggaccccct ggacctgagg
3361 cctggtgacc ttgcaagcat cccatggggc gggggcggga ccagggagaa ttaataaagt
3421 tctggacttt tgctacaaaa aaaaaaaaaa aaaaaaaaaa
//