LOCUS BC008783 1926 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HLA-B associated transcript 4, mRNA (cDNA clone
MGC:3737 IMAGE:3629572), complete cds.
ACCESSION BC008783
VERSION BC008783.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1926)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1926)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: e Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18375635.
FEATURES Location/Qualifiers
source 1..1926
/db_xref="H-InvDB:HIT000033964_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3737 IMAGE:3629572"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1926
/gene="BAT4"
/gene_synonym="D6S54E"
/gene_synonym="G5"
/db_xref="GeneID:7918"
/db_xref="HGNC:HGNC:13920"
/db_xref="MIM:142610"
CDS 652..1722
/gene="BAT4"
/gene_synonym="D6S54E"
/gene_synonym="G5"
/codon_start=1
/product="HLA-B associated transcript 4"
/protein_id="AAH08783.1"
/db_xref="GeneID:7918"
/db_xref="HGNC:HGNC:13920"
/db_xref="MIM:142610"
/translation="MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFY
EALIGDESSAPDSQRSQTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAED
KMTHRILRAAQEGDLPELRRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVS
YLLGRGAAWVGVCELSGRDAAQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYC
ENCDTHFQDSNHRTSTAHLLSLSQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGP
RGEGRANPIPTVLKRDQEGLGYRSAPQPRVTHFPAWDTRAVAGRERPPRVATLSWREE
RRREEKDRAWERDLRTYMNLEF"
BASE COUNT 441 a 507 c 576 g 402 t
ORIGIN
1 acgagggtga cgttatttca ttacacggct tctcggcatt ccacaggttt ccctccgcct
61 cctgagggcc tttcctaacc cacagagtgg attcctggct ccagaaaatg ggcttggagc
121 gggggccacg ttgaggaagg cgaagggcat tgtgggggcg ttatgtaaaa gtaggacccc
181 aaccgacaga tcctagtgct cgcgccacct gggcgcgcgg agctttgctc gtttactatt
241 gaaaaagttc cagcgcggga aactgaaccc ggagctttgc gcacgcccga gccctcaagt
301 aatgtgggtt gtggtttttg ttgttgttgt cgccacgcat gcgtcttcgt gccgtgtggc
361 tatttgattg tgtcaactct tctgattaga atggcgccat tttgcggtac ggaagctaca
421 cagcaacacg tataggagac tctccccgag atcttctagg gagtgaccca tctatttttg
481 tttgggaaga ggaaactccg aaatgggatc gcggaagact taaagggcca ggctgatttt
541 tttttcctac tggtctctga ggctgtggtt gctacagggt caccacgagc ttggcttact
601 tgtctcatcc ttcccttgcc tggtatcatt ttctcagttc tcccaaaagc catgtcccgg
661 cccttgctca tcaccttcac cccagccact gaccccagcg acctctggaa ggatgggcag
721 cagcagccac agcccgagaa gccagagtcc accctggatg gggctgcagc ccgagctttc
781 tatgaggccc tgattgggga tgagagcagc gctcctgact cccagagatc tcagactgaa
841 cctgccagag aaagaaagag aaagaaaaga agaataatga aggcaccagc agcagaagca
901 gtggcagaag gagcatcagg aagacatgga caagggagat cccttgaggc tgaggataag
961 atgactcacc ggatactgag ggcagcccag gagggggacc tgccagaact taggagactg
1021 ctggaaccgc atgaggcagg aggagctggg gggaatatca acgcccggga tgccttctgg
1081 tggaccccac tgatgtgtgc tgctcgagcg ggccaggggg cagctgtgag ctatctcctg
1141 ggccgtgggg ctgcctgggt gggggtctgt gagctgagtg gcagggatgc ggctcagctc
1201 gctgaagaag ctggcttccc tgaggtagcc cgcatggtca gggagagcca tggagagaca
1261 aggagcccgg aaaaccggtc tcctactccc tccctccagt actgcgagaa ctgtgacacc
1321 cacttccaag attccaacca ccgcacatcc actgctcacc tgctgtcact gtcgcagggt
1381 cctcagcctc ccaaccttcc acttggggtg cccatctcca gcccgggctt caaactgctg
1441 ctgagggggg gctgggagcc aggaatgggg ctgggacccc ggggtgaggg ccgtgccaat
1501 cccatcccca ctgtcctcaa gagggaccag gaaggactag gctacagatc agcaccccag
1561 ccccgagtga cacatttccc agcttgggat acccgagctg tggctgggag ggagagaccc
1621 cctcgggtgg ccacactgag ctggagggag gagagaagga gggaggagaa agacagggct
1681 tgggagcggg atctaaggac ttacatgaac ctcgagttct gactttggta aagtctgacc
1741 ctagtctgct gctgaagtct gaacttgggc ctctgacctg ggccctttga cttccccttc
1801 ctgggatctg ctcagatgca gatcctgaag tttttggtca ataggctctg tcttcgtgag
1861 agacgggctg agagtcagaa ataaatcaac catttgtggt ttaaaaaaaa aaaaaaaaaa
1921 aaaaaa
//