LOCUS BC008778 2002 bp mRNA linear HUM 21-OCT-2003
DEFINITION Homo sapiens XPA binding protein 2, mRNA (cDNA clone
IMAGE:3605650), partial cds.
ACCESSION BC008778
VERSION BC008778.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2002)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2002)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: a Column: 3.
FEATURES Location/Qualifiers
source 1..2002
/db_xref="H-InvDB:HIT000087155"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3605650"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2002
/gene="XAB2"
/gene_synonym="HCNP"
/gene_synonym="HCRN"
/db_xref="GeneID:56949"
CDS <1..1909
/gene="XAB2"
/gene_synonym="HCNP"
/gene_synonym="HCRN"
/codon_start=2
/product="XAB2 protein"
/protein_id="AAH08778.1"
/db_xref="GeneID:56949"
/translation="ARGLCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLAD
YYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEE
DDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTE
AVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQ
CGELELRHKNYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEES
LGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVS
DIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHA
MAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLR
FADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRR
SVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERD
QPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSV
PAAVFGSLKED"
misc_feature 785..1264
/gene="XAB2"
/gene_synonym="HCNP"
/gene_synonym="HCRN"
/note="PilF; Region: Tfp pilus assembly protein PilF [Cell
motility and secretion / Intracellular trafficking and
secretion]"
/db_xref="CDD:COG3063"
BASE COUNT 448 a 607 c 621 g 326 t
ORIGIN
1 ggcacgaggg ctgtgcgacc tcatctccca gaatccggac aaggtacagt ccctcaatgt
61 ggacgccatc atccgcgggg gcctcacccg cttcaccgac cagctgggca agctctggtg
121 ttctctcgcc gactactaca tccgcagcgg ccatttcgag aaggctcggg acgtgtacga
181 ggaggccatc cggacagtga tgaccgtgcg ggacttcaca caggtgtttg acagctacgc
241 ccagttcgag gagagcatga tcgctgcaaa gatggagacc gcctcggagc tggggcgcga
301 ggaggaggat gatgtggacc tggagctgcg cctggcccgc ttcgagcagc tcatcagccg
361 gcggcccctg ctcctcaaca gcgtcttgct gcgccaaaac ccacaccacg tgcacgagtg
421 gcacaagcgt gtcgccctgc accagggccg cccccgggag atcatcaaca cctacacaga
481 ggctgtgcag acggtggacc ccttcaaggc cacaggcaag ccccacactc tgtgggtggc
541 gtttgccaag ttttatgagg acaacggaca gctggacgat gcccgtgtca tcctggagaa
601 ggccaccaag gtgaacttca agcaggtgga tgacctggca agcgtgtggt gtcagtgcgg
661 agagctggag ctccgacaca agaactacga tgaggccttg cggctgctgc gaaaggccac
721 ggcgctgcct gcccgccggg ccgagtactt tgatggttca gagcccgtgc agaaccgcgt
781 gtacaagtca ctgaaggtct ggtccatgct cgccgacctg gaggagagcc tcggcacctt
841 ccagtccacc aaggccgtgt acgaccgcat cctggacctg cgtatcgcaa caccccagat
901 cgtcatcaac tatgccatgt tcctggagga gcacaagtac ttcgaggaga gcttcaaggc
961 gtacgagcgc ggcatctcgc tgttcaagtg gcccaacgtg tccgacatct ggagcaccta
1021 cctgaccaaa ttcattgccc gctatggggg ccgcaagctg gagcgggcac gggacctgtt
1081 tgaacaggct ctggacggct gccccccaaa atatgccaag accttgtacc tgctgtacgc
1141 acagctggag gaggagtggg gcctggcccg gcatgccatg gccgtgtacg agcgtgccac
1201 tagggccgtg gagcccgccc agcagtatga catgttcaac atctacatca agcgggcggc
1261 cgagatctat ggggtcaccc acacccgcgg catctaccag aaggccattg aggtgctgtc
1321 ggacgagcac gcgcgtgaga tgtgcctgcg gtttgcagac atggagtgca agctcgggga
1381 gattgaccgc gcccgggcca tctacagctt ctgctcccag atctgtgacc cccggacgac
1441 cggcgcgttc tggcagacgt ggaaggactt tgaggtccgg catggcaatg aggacaccat
1501 caaggaaatg ctgcgtatcc ggcgcagcgt gcaggccacg tacaacacgc aggtcaactt
1561 catggcctcg cagatgctca aggtctcggg cagtgccacg ggcaccgtgt ctgacctggc
1621 ccctgggcag agtggcatgg acgacatgaa gctgctggaa cagcgggcag agcagctggc
1681 ggctgaggcg gagcgtgacc agcccttgcg cgcccagagc aagatcctgt tcgtgaggag
1741 tgacgcctcc cgggaggagc tggcagagct ggcacagcag gtcaaccccg aggagatcca
1801 gctgggcgag gacgaggacg aggacgagat ggacctggag cccaacgagg ttcggctgga
1861 gcagcagagc gtgccagccg cagtgtttgg gagcctgaag gaagactgac ccatccctcc
1921 cccatccccc ctccccaccc cctccccaat acagctacgt ttgtacaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aa
//