LOCUS BC008708 965 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens hydroxysteroid (17-beta) dehydrogenase 10, mRNA (cDNA
clone MGC:15590 IMAGE:3160844), complete cds.
ACCESSION BC008708
VERSION BC008708.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 965)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 965)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: i Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..965
/db_xref="H-InvDB:HIT000033911"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15590 IMAGE:3160844"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..965
/gene="HSD17B10"
/gene_synonym="17b-HSD10"
/gene_synonym="ABAD"
/gene_synonym="ERAB"
/gene_synonym="HADH2"
/gene_synonym="HCD2"
/gene_synonym="MHBD"
/gene_synonym="SCHAD"
/db_xref="GeneID:3028"
/db_xref="HGNC:HGNC:4800"
/db_xref="MIM:300256"
CDS 12..770
/gene="HSD17B10"
/gene_synonym="17b-HSD10"
/gene_synonym="ABAD"
/gene_synonym="ERAB"
/gene_synonym="HADH2"
/gene_synonym="HCD2"
/gene_synonym="MHBD"
/gene_synonym="SCHAD"
/codon_start=1
/product="hydroxysteroid (17-beta) dehydrogenase 10"
/protein_id="AAH08708.1"
/db_xref="GeneID:3028"
/db_xref="HGNC:HGNC:4800"
/db_xref="MIM:300256"
/translation="MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN
SGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYN
LKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE
GQVGQAAYSASKGGIVGMTLPIARDLAPIGLFGTPLLTSLPEKVCNFLASQVPFPSRL
GDPAEYAHLVQAIIENPFLNGEVIRLDGAIRMQP"
BASE COUNT 249 a 252 c 272 g 192 t
ORIGIN
1 ccggcgacaa gatggcagca gcgtgtcgga gcgtgaaggg cctggtggcg gtaataaccg
61 gaggagcctc gggcctgggc ctggccacgg cggagcgact tgtggggcag ggagcctctg
121 ctgtgcttct ggacctgccc aactcgggtg gggaggccca agccaagaag ttaggaaaca
181 actgcgtttt cgccccagcc gacgtgacct ctgagaagga tgtgcaaaca gctctggctc
241 tagcaaaagg aaagtttggc cgtgtggatg tagctgtcaa ctgtgcaggc atcgcggtgg
301 ctagcaagac gtacaactta aagaagggcc agacccatac cttggaagac ttccagcgag
361 ttcttgatgt gaatctcatg ggcaccttca atgtgatccg cctggtggct ggtgagatgg
421 gccagaatga accagaccag ggaggccaac gtggggtcat catcaacact gccagtgtgg
481 ctgccttcga gggtcaggtt ggacaagctg catactctgc ttccaagggg ggaatagtgg
541 gcatgacact gcccattgct cgggatctgg ctcccatagg tctgtttggc accccactgc
601 tgaccagcct cccagagaaa gtgtgcaact tcttggccag ccaagtgccc ttccctagcc
661 gactgggtga ccctgctgag tatgctcacc tcgtacaggc catcatcgag aacccattcc
721 tcaatggaga ggtcatccgg ctggatgggg ccattcgtat gcagccttga agggagaagg
781 cagagaaaac acacgctcct ctgcccttcc tttccctggg gtactactct ccagcttggg
841 aggaagccca gtagccattt tgtaactgcc taccagtcgc cctctgtgcc taataaagtc
901 tctttttctc acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aaaac
//