LOCUS BC008701 1837 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Rho GDP dissociation inhibitor (GDI) alpha, mRNA (cDNA
clone MGC:15464 IMAGE:2966760), complete cds.
ACCESSION BC008701
VERSION BC008701.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1837)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1837)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC008701.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1837
/db_xref="H-InvDB:HIT000033907"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15464 IMAGE:2966760"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1837
/gene="ARHGDIA"
/gene_synonym="RHOGDI"
/gene_synonym="RHOGDI-1"
/db_xref="GeneID:396"
/db_xref="HGNC:HGNC:678"
/db_xref="MIM:601925"
CDS 28..642
/gene="ARHGDIA"
/gene_synonym="RHOGDI"
/gene_synonym="RHOGDI-1"
/codon_start=1
/product="Rho GDP dissociation inhibitor (GDI) alpha"
/protein_id="AAH08701.1"
/db_xref="GeneID:396"
/db_xref="HGNC:HGNC:678"
/db_xref="MIM:601925"
/translation="MAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQKSIQEIQELDKD
DESLRKYKEALLGRVAVSADPNVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSF
VLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLT
PVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDWKD"
BASE COUNT 362 a 631 c 527 g 317 t
ORIGIN
1 gtgtcccgac ccaggctaag cttgagcatg gctgagcagg agcccacagc cgagcagctg
61 gcccagattg cagcggagaa cgaggaggat gagcactcgg tcaactacaa gcccccggcc
121 cagaagagca tccaggagat ccaggagctg gacaaggacg acgagagcct gcgaaagtac
181 aaggaggccc tgctgggccg cgtggccgtt tccgcagacc ccaacgtccc caacgtcgtg
241 gtgactggcc tgaccctggt gtgcagctcg gccccgggcc ccctggagct ggacctgacg
301 ggcgacctgg agagcttcaa gaagcagtcg tttgtgctga aggagggtgt ggagtaccgg
361 ataaaaatct ctttccgggt taaccgagag atagtgtccg gcatgaagta catccagcat
421 acgtacagga aaggcgtcaa gattgacaag actgactaca tggtaggcag ctatgggccc
481 cgggccgagg agtacgagtt cctgaccccc gtggaggagg cacccaaggg tatgctggcc
541 cggggcagct acagcatcaa gtcccgcttc acagacgacg acaagaccga ccacctgtcc
601 tgggagtgga atctcaccat caagaaggac tggaaggact gagcccagcc agaggcgggc
661 agggcagact gacggacgga cgacggacag gcggatgtgt cccccccagc ccctcccctc
721 cccataccaa agtgctgaca ggccctccgt gcccctccca ccctggtccg cctccctggc
781 ctggctcaac cgagtgcctc cgacccccct cctcagccct cccccaccca caggcccagc
841 ctcctcggtc tcctgtctcg ttgctgcttc tgcctgtgct gtgggggaga gaggccgcag
901 ccaggcctct gctgcccttt ctgtgccccc caggttctat ctccccgtca cacccgaggc
961 ctggcttcag gagggagcgg agcagccatt ctccaggccc cgtggttgcc cctggacgtg
1021 tgcgtctgct gctccggggt ggagctgggg tgtgggatgc acggcctcgt gggggccggg
1081 ccgtcctcca gccccgctgc tccctggcca gcccccttgt cgctgtcggt cccgtctaac
1141 catgatgcct taacatgtgg agtgtaccgt ggggcctcac tagcctctaa ctccctgtgt
1201 ctgcatgagc atgtggcctc cccgtccctt ccccggtggc gaacccagtg acccagggac
1261 acgtggggtg tgctgctgct gctccccagc ccaccagtgc ctggccagcc tgcccccttc
1321 cctggacagg gctgtggaga tggctccggc ggcttgggga aagccaaatt gccaaaactc
1381 aagtcacctc agtaccatcc aggaggctgg gtattgtcct gcctctgcct tttctgtctc
1441 agcgggcagt gcccagagcc cacacccccc caagagccct cgatggacag cctcacccac
1501 cccacctggg cccagccagg agccccgcct ggccatcagt atttattgcc tccgtccgtg
1561 ccgtccctgg gccactggcc tggcgcctgt tcccccaggc tctcagtgcc accacccccg
1621 gcaggccttc cctgacccag ccaggaacaa acaagggacc aagtgcacac attgctgaga
1681 gccgtctcct gtgcctcccc cgccccatcc ccggtcttcg tgttgtgtct gccaggctca
1741 ggcagaggcg cctgtccctg cttcttttct gaccgggaaa taaatgcccc tgaaggaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//